RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 HIP1RO75146 1068 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 SSBP05455 408 aaKnown RBP eCLIP20.04■□□□□ 0.8
IRF3-216ENST00000597180 STAG3L1P0CL83 205 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 NAMPTP43490 491 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 NUCB2P80303 420 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 AXDND1Q5T1B0 1012 aaPredicted RBP20.04■□□□□ 0.8
IRF3-216ENST00000597180 PPP2R2DQ66LE6 453 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 DEFB123Q8N688 67 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 DRC1Q96MC2 740 aa20.04■□□□□ 0.8
IRF3-216ENST00000597180 ELAC1Q9H777 363 aaKnown RBP20.04■□□□□ 0.8
IRF3-216ENST00000597180 PIN4Q9Y237 131 aaKnown RBP20.04■□□□□ 0.8
IRF3-216ENST00000597180 INO80B-WBP1J3KQ70 363 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 DGKIO75912 1065 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 ARHGEF15O94989 841 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 KRT85P78386 507 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 TAP1Q03518 808 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 NAALADL2Q58DX5 795 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 ARSHQ5FYA8 562 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 LARP4BQ92615 738 aaKnown RBP20.03■□□□□ 0.8
IRF3-216ENST00000597180 ZNF689Q96CS4 500 aaPredicted RBP20.03■□□□□ 0.8
IRF3-216ENST00000597180 IFT74Q96LB3 600 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 YME1L1Q96TA2 773 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 C2orf40Q9H1Z8 148 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 C17orf75Q9HAS0 396 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 POLD4Q9HCU8 107 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 TMEM161AQ9NX61 479 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 MTMR10Q9NXD2 777 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 PCDHA7Q9UN72 937 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 PCDHB7Q9Y5E2 793 aa20.03■□□□□ 0.8
IRF3-216ENST00000597180 CHD9Q3L8U1 2897 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 A0A0U1RQF3 1178 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 TSPAN1O60635 241 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 ERLIN2O94905 339 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 AXLP30530 894 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 HOXA11P31270 313 aaPredicted RBP20.02■□□□□ 0.8
IRF3-216ENST00000597180 MCM6Q14566 821 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 AMHR2Q16671 573 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 FAM187BQ17R55 369 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 RRAGBQ5VZM2 374 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 SHC4Q6S5L8 630 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 CCDC73Q6ZRK6 1079 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 ZBTB8OSQ8IWT0 167 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 LRFN2Q9ULH4 789 aa20.02■□□□□ 0.8
IRF3-216ENST00000597180 COL4A4P53420 1690 aaPredicted RBP20.01■□□□□ 0.79
IRF3-216ENST00000597180 A0A087X0B3 334 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 LINC01553A4QN01 128 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 ANP32AP39687 249 aaKnown RBP20.01■□□□□ 0.79
IRF3-216ENST00000597180 ME1P48163 572 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 TWF2Q6IBS0 349 aaKnown RBP20.01■□□□□ 0.79
IRF3-216ENST00000597180 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 GPBP1Q86WP2 473 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 ECHDC2Q86YB7 292 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 DEPTORQ8TB45 409 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 LEO1Q8WVC0 666 aaPredicted RBP20.01■□□□□ 0.79
IRF3-216ENST00000597180 CHAMP1Q96JM3 812 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 PRIMPOLQ96LW4 560 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 CCDC113Q9H0I3 377 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 FZD8Q9H461 694 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 ODF2LQ9ULJ1 636 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 ADGRA3Q8IWK6 1321 aa20.01■□□□□ 0.79
IRF3-216ENST00000597180 NPTX2P47972 431 aa20■□□□□ 0.79
IRF3-216ENST00000597180 RAB27AP51159 221 aa20■□□□□ 0.79
IRF3-216ENST00000597180 EFNA5P52803 228 aa20■□□□□ 0.79
IRF3-216ENST00000597180 PEX3P56589 373 aa20■□□□□ 0.79
IRF3-216ENST00000597180 RAD51AP2Q09MP3 1159 aa20■□□□□ 0.79
IRF3-216ENST00000597180 DMP1Q13316 513 aaPredicted RBP20■□□□□ 0.79
IRF3-216ENST00000597180 DHX8Q14562 1220 aaKnown RBP20■□□□□ 0.79
IRF3-216ENST00000597180 ZNF598Q86UK7 904 aaKnown RBP20■□□□□ 0.79
IRF3-216ENST00000597180 CMTR2Q8IYT2 770 aaKnown RBP20■□□□□ 0.79
IRF3-216ENST00000597180 CCDC51Q96ER9 411 aa20■□□□□ 0.79
IRF3-216ENST00000597180 FAM161BQ96MY7 647 aa20■□□□□ 0.79
IRF3-216ENST00000597180 GUCD1Q96NT3 240 aa20■□□□□ 0.79
IRF3-216ENST00000597180 FAM105AQ9NUU6 356 aa20■□□□□ 0.79
IRF3-216ENST00000597180 PRMT7Q9NVM4 692 aaPredicted RBP20■□□□□ 0.79
IRF3-216ENST00000597180 NPHP3-ACAD11A0A0J9YXS1 232 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 ZNF623O75123 536 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 EOMESO95936 686 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 SKIP12755 728 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 PLS3P13797 630 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 ATF7P17544 494 aaPredicted RBP19.99■□□□□ 0.79
IRF3-216ENST00000597180 ARF4P18085 180 aaPredicted RBP19.99■□□□□ 0.79
IRF3-216ENST00000597180 NCLP19338 710 aaKnown RBP19.99■□□□□ 0.79
IRF3-216ENST00000597180 STAT6P42226 847 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 NCBP1Q09161 790 aaKnown RBP19.99■□□□□ 0.79
IRF3-216ENST00000597180 GRIN2CQ14957 1233 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 MAPK6Q16659 721 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 UBXN11Q5T124 520 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 RESP18Q5W5W9 173 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 NOTUMQ6P988 496 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 SPIRE2Q8WWL2 714 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 SPATA32Q96LK8 384 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 REEP2Q9BRK0 252 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 NTPCRQ9BSD7 190 aaKnown RBP19.99■□□□□ 0.79
IRF3-216ENST00000597180 KIFC3Q9BVG8 833 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 SCAND2PQ9GZW5 306 aaPredicted RBP19.99■□□□□ 0.79
IRF3-216ENST00000597180 RNF19AQ9NV58 838 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 ARHGAP28Q9P2N2 729 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 KCNG1Q9UIX4 513 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 CNTNAP2Q9UHC6 1331 aa19.99■□□□□ 0.79
IRF3-216ENST00000597180 SFI1A8K8P3 1242 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms