RNA–Protein interactions for RNA: ENST00000596403.1

SIPA1L3-207, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-207ENST00000596403 COL9A3Q14050 684 aaPredicted RBP16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 MTERF2Q49AM1 385 aa16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 SLC22A17Q8WUG5 538 aa16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 TMEM175Q9BSA9 504 aa16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 CDH22Q9UJ99 828 aa16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 ZFHX2Q9C0A1 2572 aaPredicted RBP16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 LOXHD1Q8IVV2 1947 aa16.41■□□□□ 0.22
SIPA1L3-207ENST00000596403 A0A087WZ62 844 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 MSH4O15457 936 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 NR1I2O75469 434 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 ID4P47928 161 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 TARBP2Q15633 366 aaKnown RBP16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 FRMD5Q7Z6J6 570 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 RHPN2Q8IUC4 686 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 NXPE3Q969Y0 559 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 FDXACB1Q9BRP7 624 aaPredicted RBP16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 NRDE2Q9H7Z3 1164 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 UBN1Q9NPG3 1134 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 SUCLA2Q9P2R7 463 aaPredicted RBP16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 DUSP12Q9UNI6 340 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 FAN1Q9Y2M0 1017 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 PPME1Q9Y570 386 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 CNTNAP2Q9UHC6 1331 aa16.4■□□□□ 0.22
SIPA1L3-207ENST00000596403 STK25O00506 426 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 URODP06132 367 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 NLRP5P59047 1200 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 LETM2Q2VYF4 491 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 BMP2KLQ5H9B9 411 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 CCDC105Q8IYK2 499 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 TRIM22Q8IYM9 498 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 AUTS2Q8WXX7 1259 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 SLC7A3Q8WY07 619 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 LENG9Q96B70 501 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 UNC45AQ9H3U1 944 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 TRIOO75962 3097 aa16.39■□□□□ 0.21
SIPA1L3-207ENST00000596403 EVPLQ92817 2033 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 IGKV6-21A0A0C4DH24 114 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 DDX11L8A8MPP1 907 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 MAFO75444 373 aaPredicted RBP16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 CSDE1O75534 798 aaKnown RBP16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 OFD1O75665 1012 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 ADH1AP07327 375 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 Q4G0T1 1027 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 KCNG4Q8TDN1 519 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 LPPQ93052 612 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 NLRP4Q96MN2 994 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 KLHL5Q96PQ7 755 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 RSAD1Q9HA92 442 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 KCNK12Q9HB15 430 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 WNT16Q9UBV4 365 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 PCDHB2Q9Y5E7 798 aa16.38■□□□□ 0.21
SIPA1L3-207ENST00000596403 SLC11A1P49279 550 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 CLCN4P51793 760 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 PSMC5P62195 406 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 ANGPT1Q15389 498 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 UGCGQ16739 394 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 SRGAP1Q7Z6B7 1085 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 TMEM173Q86WV6 379 aaPredicted RBP16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 SIX5Q8N196 739 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 DTWD2Q8NBA8 298 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 BRF1Q92994 677 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 RHOBTB2Q9BYZ6 727 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 SMOC2Q9H3U7 446 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 AGPAT5Q9NUQ2 364 aa16.37■□□□□ 0.21
SIPA1L3-207ENST00000596403 GAS2O43903 313 aaKnown RBP16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 PSMD10O75832 226 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 CNPP09543 421 aaKnown RBP16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 PSMA5P28066 241 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 GBP2P32456 591 aaPredicted RBP16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 ZC3H14Q6PJT7 736 aaKnown RBP16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 MOXD1Q6UVY6 613 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 Q6ZUG5 572 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 HACE1Q8IYU2 909 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 TBCKQ8TEA7 893 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 PHKBQ93100 1093 aa16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
SIPA1L3-207ENST00000596403 ASAP2O43150 1006 aa16.35■□□□□ 0.21
SIPA1L3-207ENST00000596403 CDC45O75419 566 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms