RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FILIP1Q7Z7B0 1213 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 SLC9A9Q8IVB4 645 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 C12orf56Q8IXR9 622 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 PPP1R13LQ8WUF5 828 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 NFKBIZQ9BYH8 718 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 CCDC113Q9H0I3 377 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 PAK6Q9NQU5 681 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 DMAC2Q9NW81 257 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 CGNQ9P2M7 1197 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 PHLPP2Q6ZVD8 1323 aa16.19■□□□□ 0.18
SHKBP1-211ENST00000595945 KIAA0100Q14667 2235 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 KCNJ18B7U540 433 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 ADCY5O95622 1261 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 PIGRP01833 764 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 NR3C1P04150 777 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 GJB1P08034 283 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 EFNA5P52803 228 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 ACLYP53396 1101 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 PTENP60484 403 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 TFDP1Q14186 410 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 KCNJ12Q14500 433 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 HSP90AA4PQ58FG1 418 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 TCP11X2Q5H9J9 407 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 RUFY4Q6ZNE9 571 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 RHPN2Q8IUC4 686 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 FAM114A1Q8IWE2 563 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 C7orf31Q8N865 590 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 C2orf40Q9H1Z8 148 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 GRIN2DO15399 1336 aa16.18■□□□□ 0.18
SHKBP1-211ENST00000595945 A0A1B0GTH6 734 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 CETN3O15182 167 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 CLIC2O15247 247 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 TREHO43280 583 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 GNAT1P11488 350 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 CYP2C9P11712 490 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 CDK11BP21127 795 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 MARSP56192 900 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 ZNF200P98182 395 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 ADAM9Q13443 819 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 KRT31Q15323 416 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 SLC39A4Q6P5W5 647 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 HS2ST1Q7LGA3 356 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 SYCP3Q8IZU3 236 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 RNF149Q8NC42 400 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 MRFAP1L1Q96HT8 127 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 CNOT6LQ96LI5 555 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 NAP1L5Q96NT1 182 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 GTF2IRD1Q9UHL9 959 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
SHKBP1-211ENST00000595945 TISP43B9A030 160 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 ANKRD63C9JTQ0 380 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 K7ERI5 159 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 SLC16A3O15427 465 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 EDN1P05305 212 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 SRGAP2CP0DJJ0 459 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 CCL5P13501 91 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 NR2F2P24468 414 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 RPL13P26373 211 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 GPC3P51654 580 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 PLCB2Q00722 1185 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 MTFR1Q15390 333 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 ARRDC4Q8NCT1 418 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 XPO4Q9C0E2 1151 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 ADAMTS10Q9H324 1103 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 FZD8Q9H461 694 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 IFT122Q9HBG6 1241 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 INTS13Q9NVM9 706 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 IFNKQ9P0W0 207 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 AKT3Q9Y243 479 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 STYXL1Q9Y6J8 313 aa16.16■□□□□ 0.18
SHKBP1-211ENST00000595945 CBFA2T2O43439 604 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 GNA14O95837 355 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 SERPINC1P01008 464 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 VTNP04004 478 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 HSPA1AP0DMV8 641 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 HSPA1BP0DMV9 641 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 CDC25BP30305 580 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 ADSSP30520 456 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 PHKA2P46019 1235 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 LBX1P52954 281 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 COPB1P53618 953 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 UBASH3AP57075 661 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 MCCD1P59942 119 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms