RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 ARHGEF26Q96DR7 871 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 AGPAT1Q99943 283 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 ADAM7Q9H2U9 754 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 PARVGQ9HBI0 331 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 HAUS2Q9NVX0 235 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 NRXN2Q9P2S2 1712 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 P4HA2O15460 535 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 MMEP08473 750 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
VRK3-209ENST00000594948 TRAF1Q13077 416 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 PRPF4BQ13523 1007 aaKnown RBP14.3□□□□□ -0.12
VRK3-209ENST00000594948 CTTNQ14247 550 aaKnown RBP14.3□□□□□ -0.12
VRK3-209ENST00000594948 VPS72Q15906 364 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 MFSD5Q6N075 450 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 CDC42EP5Q6NZY7 148 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 MYCT1Q8N699 235 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
VRK3-209ENST00000594948 TRIM31Q9BZY9 425 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 THAP2Q9H0W7 228 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
VRK3-209ENST00000594948 TPX2Q9ULW0 747 aaKnown RBP14.3□□□□□ -0.12
VRK3-209ENST00000594948 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
VRK3-209ENST00000594948 CFAP73A6NFT4 308 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 C6orf229H3BNL8 230 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 SHBGP04278 402 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 BCRP11274 1271 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 RARGP13631 454 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 ABCB4P21439 1286 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 KCNA1Q09470 495 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 RIPK1Q13546 671 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 GIMAP7Q8NHV1 300 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 FBXO25Q8TCJ0 367 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 ALG3Q92685 438 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 UIMC1Q96RL1 719 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 FIZ1Q96SL8 496 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 ZSWIM1Q9BR11 485 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 WNT8AQ9H1J5 351 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 TAOK3Q9H2K8 898 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 LRRC4CQ9HCJ2 640 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 AGPAT3Q9NRZ7 376 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 COG5Q9UP83 839 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 SLC12A4Q9UP95 1085 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 PCDHA3Q9Y5H8 950 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 ALG6Q9Y672 507 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 IGLV3-22A0A075B6J6 115 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 EML1O00423 815 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 NMT1P30419 496 aaKnown RBP14.29□□□□□ -0.12
VRK3-209ENST00000594948 PLTPP55058 493 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 BFSP1Q12934 665 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 CBWD6Q4V339 395 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 CBWD3Q5JTY5 395 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 CBWD5Q5RIA9 395 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 SEL1L2Q5TEA6 688 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 TAOK1Q7L7X3 1001 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 FAM228AQ86W67 206 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 CERS5Q8N5B7 392 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 C12orf50Q8NA57 414 aaPredicted RBP14.29□□□□□ -0.12
VRK3-209ENST00000594948 MDM1Q8TC05 714 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 AZI2Q9H6S1 392 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 INTS9Q9NV88 658 aaKnown RBP14.29□□□□□ -0.12
VRK3-209ENST00000594948 USP20Q9Y2K6 914 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
VRK3-209ENST00000594948 RGPD3A6NKT7 1758 aaPredicted RBP14.28□□□□□ -0.12
VRK3-209ENST00000594948 RGPD4Q7Z3J3 1758 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 KLRG2A4D1S0 409 aaPredicted RBP14.28□□□□□ -0.12
VRK3-209ENST00000594948 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
VRK3-209ENST00000594948 EZRP15311 586 aaKnown RBP14.28□□□□□ -0.12
VRK3-209ENST00000594948 GPC5P78333 572 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 CYP4A11Q02928 519 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 SYDE2Q5VT97 1194 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 MSL1Q68DK7 614 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 CRELD2Q6UXH1 353 aaPredicted RBP14.28□□□□□ -0.12
VRK3-209ENST00000594948 GPATCH11Q8N954 259 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 LMO3Q8TAP4 145 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 GLG1Q92896 1179 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 ART4Q93070 314 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 SELENOSQ9BQE4 189 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 STRA6Q9BX79 667 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 DNAJC18Q9H819 358 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.28□□□□□ -0.12
VRK3-209ENST00000594948 SAMD15Q9P1V8 674 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 SYNPO2Q9UMS6 1093 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 ZNFX1Q9P2E3 1918 aaKnown RBP14.28□□□□□ -0.12
VRK3-209ENST00000594948 ZNF646O15015 1829 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms