RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 DNAJB1P25685 340 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 PRPHP41219 470 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 KCNQ1P51787 676 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 TFDP1Q14186 410 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 TIGD5Q53EQ6 642 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 NAALADL2Q58DX5 795 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 PADI6Q6TGC4 694 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 COLGALT1Q8NBJ5 622 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 SNX29Q8TEQ0 813 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 TRAIPQ9BWF2 469 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 NSUN3Q9H649 340 aaKnown RBP16.39■□□□□ 0.21
USE1-205ENST00000594724 POLD4Q9HCU8 107 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 DDX19AQ9NUU7 478 aaKnown RBP16.39■□□□□ 0.21
USE1-205ENST00000594724 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 PCDHB12Q9Y5F1 795 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 XIRP2A4UGR9 3374 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 KIAA1671Q9BY89 1806 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
USE1-205ENST00000594724 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 ZNF623O75123 536 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 MUTP22033 750 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 PBX3P40426 434 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 ATP2C1P98194 919 aaPredicted RBP16.38■□□□□ 0.21
USE1-205ENST00000594724 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 MCPH1Q8NEM0 835 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 POF1BQ8WVV4 589 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 CPB2Q96IY4 423 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 MMTAG2Q9BU76 263 aaKnown RBP16.38■□□□□ 0.21
USE1-205ENST00000594724 RAB34Q9BZG1 259 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 BHMT2Q9H2M3 363 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 AAASQ9NRG9 546 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 PCDHB2Q9Y5E7 798 aa16.38■□□□□ 0.21
USE1-205ENST00000594724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.37■□□□□ 0.21
USE1-205ENST00000594724 E9PMD0 336 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 TSPAN1O60635 241 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 FGF18O76093 207 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 ERLIN2O94905 339 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 SKIP12755 728 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 BMP1P13497 986 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 LAG3P18627 525 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 CYP11B2P19099 503 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 IRS1P35568 1242 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 MBTD1Q05BQ5 628 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 AAK1Q2M2I8 961 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 UBXN11Q5T124 520 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 KRT79Q5XKE5 535 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 IFNLR1Q8IU57 520 aaPredicted RBP16.37■□□□□ 0.21
USE1-205ENST00000594724 THNSL1Q8IYQ7 743 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 LRRC43Q8N309 656 aa16.37■□□□□ 0.21
USE1-205ENST00000594724 SYMPKQ92797 1274 aaKnown RBP16.37■□□□□ 0.21
USE1-205ENST00000594724 UBE2ZQ9H832 354 aaPredicted RBP16.37■□□□□ 0.21
USE1-205ENST00000594724 VWA3AA6NCI4 1184 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 LRRIQ4A6NIV6 560 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 RAB27AP51159 221 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
USE1-205ENST00000594724 AMHR2Q16671 573 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 KCNT2Q6UVM3 1135 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 AGMOQ6ZNB7 445 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 EP400NLQ6ZTU2 488 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 BSNDQ8WZ55 320 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 IGFLR1Q9H665 355 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 INPP5FQ9Y2H2 1132 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 PCDHGC5Q9Y5F6 944 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
USE1-205ENST00000594724 VCANP13611 3396 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
USE1-205ENST00000594724 B4GALT5O43286 388 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 OFD1O75665 1012 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 KCNA5P22460 613 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 AXLP30530 894 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.21
USE1-205ENST00000594724 HYAL1Q12794 435 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 GLB1LQ6UWU2 654 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 KCNK18Q7Z418 384 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 MRPL10Q7Z7H8 261 aaKnown RBP16.35■□□□□ 0.21
USE1-205ENST00000594724 ADGRD2Q7Z7M1 963 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 CDR2LQ86X02 465 aaPredicted RBP16.35■□□□□ 0.21
USE1-205ENST00000594724 MICAL1Q8TDZ2 1067 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 PGBD4Q96DM1 585 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 ZNF558Q96NG5 402 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 PLIN2Q99541 437 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
USE1-205ENST00000594724 NFKBIZQ9BYH8 718 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
USE1-205ENST00000594724 NT5C1B-RDH14C9J2C7 533 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 EYA4O95677 639 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 ARF4P18085 180 aaPredicted RBP16.34■□□□□ 0.21
USE1-205ENST00000594724 PDCP20941 246 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 SYT1P21579 422 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 AFF1P51825 1210 aaKnown RBP16.34■□□□□ 0.21
USE1-205ENST00000594724 NCBP1Q09161 790 aaKnown RBP16.34■□□□□ 0.21
USE1-205ENST00000594724 PCBP1Q15365 356 aaKnown RBP eCLIP16.34■□□□□ 0.21
USE1-205ENST00000594724 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 NOMO2Q5JPE7 1267 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 NOTUMQ6P988 496 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 SMG8Q8ND04 991 aaKnown RBP16.34■□□□□ 0.21
USE1-205ENST00000594724 ADAMTS19Q8TE59 1207 aa16.34■□□□□ 0.21
USE1-205ENST00000594724 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms