RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 RPSAP08865 295 aaKnown RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 CAV1Q03135 178 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 GDAP1Q8TB36 358 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 GCOM2Q9BZD3 368 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 TBC1D22BQ9NU19 505 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 FAM187AA6NFU0 413 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 RNF139Q8WU17 664 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 L2HGDHQ9H9P8 463 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 SEL1LQ9UBV2 794 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 PMS2P54278 862 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 TFAMQ00059 246 aaKnown RBP13.61□□□□□ -0.23
DNMT1-228ENST00000592705 KRT76Q01546 638 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 PSMD6Q15008 389 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 C12orf60Q5U649 245 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 NLRP14Q86W24 1093 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 ZNF34Q8IZ26 560 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 MORC4Q8TE76 937 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 FAM149B1Q96BN6 582 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
DNMT1-228ENST00000592705 K7ERI5 159 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 ACSL3O95573 720 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 ARHGAP4P98171 946 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 MAP7Q14244 749 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 NBPF9Q3BBW0 867 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 NUGGCQ68CJ6 796 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 CENPUQ71F23 418 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
DNMT1-228ENST00000592705 ESYT3A0FGR9 886 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 CHRNA3P32297 505 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 USP11P51784 963 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 MAGOHP61326 146 aaKnown RBP13.61□□□□□ -0.23
DNMT1-228ENST00000592705 LLGL1Q15334 1064 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
DNMT1-228ENST00000592705 LRRC4Q9HBW1 653 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 PPP2R3BQ9Y5P8 575 aa13.61□□□□□ -0.23
DNMT1-228ENST00000592705 TDP2O95551 362 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 VEPH1Q14D04 833 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 ICE2Q659A1 982 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 XXYLT1Q8NBI6 393 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 SSU72P8A0A1W2PR75 194 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 WDR64B1ANS9 1081 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 MAPK13O15264 365 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 SH2D4BQ5SQS7 431 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 RPUSD2Q8IZ73 545 aaKnown RBP13.6□□□□□ -0.23
DNMT1-228ENST00000592705 LRRC1Q9BTT6 524 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 GINM1Q9NU53 330 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 TACC3Q9Y6A5 838 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 GOLGA8JA6NMD2 632 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 ANKRD65E5RJM6 399 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 IPO5O00410 1097 aaKnown RBP13.6□□□□□ -0.23
DNMT1-228ENST00000592705 TRPA1O75762 1119 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-228ENST00000592705 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
DNMT1-228ENST00000592705 EPB41L4AQ9HCS5 686 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-228ENST00000592705 LCMT1Q9UIC8 334 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 ADGRB2O60241 1585 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 CHUKO15111 745 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 PFDN6O15212 129 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 OPHN1O60890 802 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 SNAP25P60880 206 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 PDE1BQ01064 536 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 NR1H3Q13133 447 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 C4orf50Q6ZRC1 276 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 PSPC1Q8WXF1 523 aaKnown RBP13.6□□□□□ -0.23
DNMT1-228ENST00000592705 DAGLAQ9Y4D2 1042 aa13.6□□□□□ -0.23
DNMT1-228ENST00000592705 GOLGA8SH3BPF8 625 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 CPP00450 1065 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 GYPCP04921 128 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 TSPY1Q01534 308 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 ITKQ08881 620 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 SLFN12LQ6IEE8 588 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 KSR1Q8IVT5 923 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 PSD3Q9NYI0 1048 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 SEPT10Q9P0V9 454 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 CNOT8Q9UFF9 292 aaKnown RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 NXNQ6DKJ4 435 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 MCPH1Q8NEM0 835 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 AAASQ9NRG9 546 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 A0A1W2PQJ5 194 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 TJP3O95049 919 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 PLS3P13797 630 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 PEX3P56589 373 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 TNFAIP2Q03169 654 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 DRAP1Q14919 205 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms