RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 WRAP73Q9P2S5 460 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 COG5Q9UP83 839 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 NR2E1Q9Y466 385 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 E7EVH7 732 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 GAS7O60861 476 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 DR1Q01658 176 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
ZNF540-210ENST00000592533 PTPROQ16827 1216 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
ZNF540-210ENST00000592533 PHLDB3Q6NSJ2 640 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 AGPAT1Q99943 283 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 THAP2Q9H0W7 228 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
ZNF540-210ENST00000592533 HERC5Q9UII4 1024 aaKnown RBP12.56□□□□□ -0.4
ZNF540-210ENST00000592533 WDR81Q562E7 1941 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 GGPS1O95749 300 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 HPDP32754 393 aaPredicted RBP12.56□□□□□ -0.4
ZNF540-210ENST00000592533 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 KCNV1Q6PIU1 500 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 DAW1Q8N136 415 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 MORC4Q8TE76 937 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 PCYOX1Q9UHG3 505 aa12.56□□□□□ -0.4
ZNF540-210ENST00000592533 TRIM49P0CI25 452 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 TRIM49CP0CI26 452 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 BCRP11274 1271 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ALG3Q92685 438 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 CEP89Q96ST8 783 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 RIT2Q99578 217 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 TRIM51Q9BSJ1 452 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 UNC45AQ9H3U1 944 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 POLD4Q9HCU8 107 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 TAS2R14Q9NYV8 317 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 CNOT8Q9UFF9 292 aaKnown RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ZBTB39O15060 712 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ECE2O60344 883 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 CTNNA2P26232 953 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 CYP2J2P51589 502 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ACTN3Q08043 901 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 EPC2Q52LR7 807 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PALB2Q86YC2 1186 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PGM2Q96G03 612 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PSMD1Q99460 953 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ERVK-5Q9HDB9 667 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 FOXN3O00409 490 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 KIAA0391O15091 583 aaKnown RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PHF2O75151 1096 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 HNRNPH1P31943 449 aaKnown RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 CHRNA3P32297 505 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 USP8P40818 1118 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PTGIRP43119 386 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 SNRPFP62306 86 aaKnown RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ZDHHC24Q6UX98 284 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 KSR1Q8IVT5 923 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 FAM129AQ9BZQ8 928 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 PABPC3Q9H361 631 aaKnown RBP12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ARHGEF10LQ9HCE6 1279 aa12.55□□□□□ -0.4
ZNF540-210ENST00000592533 ALAS1P13196 640 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 ABCB4P21439 1286 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 KIAA1755Q5JYT7 1200 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 P3H4Q92791 437 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 LXNQ9BS40 222 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 TMEM109Q9BVC6 243 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 DPH5Q9H2P9 285 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 ST6GALNAC4Q9H4F1 302 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 DDX20Q9UHI6 824 aaKnown RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 MRPL11Q9Y3B7 192 aaKnown RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 PCDHA3Q9Y5H8 950 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 ALG6Q9Y672 507 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 CAPN7Q9Y6W3 813 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 HIP1RO75146 1068 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 KRT71Q3SY84 523 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 CD101Q93033 1021 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 TATDN2Q93075 761 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 ZSWIM1Q9BR11 485 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 ZNF577Q9BSK1 485 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 GOPCQ9HD26 462 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 GRHL1Q9NZI5 618 aa12.54□□□□□ -0.4
ZNF540-210ENST00000592533 CNOT7Q9UIV1 285 aaKnown RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
ZNF540-210ENST00000592533 CHMP2AO43633 222 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 EXOC3O60645 756 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CFBP00751 764 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms