RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NBEAQ8NFP9 2946 aa7.4□□□□□ -1.23
DNMT1-222ENST00000590619 LAMA5O15230 3695 aa7.4□□□□□ -1.23
DNMT1-222ENST00000590619 B4GALT3O60512 393 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 OFD1O75665 1012 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 DDHD2O94830 711 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 ATG7O95352 703 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 VTNP04004 478 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 CAPNS1P04632 268 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 ALDH2P05091 517 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 FSHRP23945 695 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 HOXC13P31276 330 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 CXCL12P48061 93 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 NOVA1P51513 510 aaKnown RBP7.39□□□□□ -1.23
DNMT1-222ENST00000590619 AK2P54819 239 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 NTHL1P78549 312 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 SATB1Q01826 763 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 GAS6Q14393 721 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 PPP2R5DQ14738 602 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 LONRF3Q496Y0 759 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 USP17L6PQ6QN14 398 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 PALB2Q86YC2 1186 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 TBC1D10CQ8IV04 446 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 HDAC7Q8WUI4 952 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 ESR2Q92731 530 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 FGF13Q92913 245 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 PHKBQ93100 1093 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 GPRASP2Q96D09 838 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 RPS6KC1Q96S38 1066 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 PIGSQ96S52 555 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 PLA2G2FQ9BZM2 168 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 ADAMTS10Q9H324 1103 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 RXFP1Q9HBX9 757 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 HEBP1Q9NRV9 189 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 ZBTB40Q9NUA8 1239 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 TBC1D13Q9NVG8 400 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 CACNA2D2Q9NY47 1150 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 DPP7Q9UHL4 492 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 MAD2L2Q9UI95 211 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 MRPS17Q9Y2R5 130 aaKnown RBP7.39□□□□□ -1.23
DNMT1-222ENST00000590619 UNC79Q9P2D8 2635 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 LOC400499M0QZD8 3231 aa7.39□□□□□ -1.23
DNMT1-222ENST00000590619 DOCK5Q9H7D0 1870 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 CARNS1A5YM72 827 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 PALM3A6NDB9 673 aaPredicted RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 MEIS3P2A8K0S8 358 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ZBTB42B2RXF5 422 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 MEIS2O14770 477 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 MAFGO15525 162 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 TGM5O43548 720 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 HBP1O60381 514 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 GLUD1P00367 558 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ADH1AP07327 375 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 PCP11498 1178 aaKnown RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ATP4AP20648 1035 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 FGFR4P22455 802 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 CCR3P51677 355 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 NLRP11P59045 1033 aaKnown RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ACTR2P61160 394 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ZNF252P-AS1Q0IIN9 211 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 CCDC178Q5BJE1 867 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 PLA2G2CQ5R387 149 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 MTSS1LQ765P7 747 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 GRASPQ7Z6J2 395 aaPredicted RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 HOMER1Q86YM7 354 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ENAHQ8N8S7 591 aaPredicted RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 LPPQ93052 612 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 CDHR1Q96JP9 859 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ZSCAN10Q96SZ4 725 aaPredicted RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 KXD1Q9BQD3 176 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 GBP3Q9H0R5 595 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 SMOC1Q9H4F8 434 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 PLEKHA4Q9H4M7 779 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 RIOX1Q9H6W3 641 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 JADE2Q9NQC1 790 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ZDHHC7Q9NXF8 308 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 ZSWIM5Q9P217 1185 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 SLC9A2Q9UBY0 812 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 NDRG2Q9UN36 371 aaKnown RBP7.38□□□□□ -1.23
DNMT1-222ENST00000590619 FAN1Q9Y2M0 1017 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 UBIAD1Q9Y5Z9 338 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 RALGAPA1Q6GYQ0 2036 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 PATJQ8NI35 1801 aa7.38□□□□□ -1.23
DNMT1-222ENST00000590619 F5P12259 2224 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 MIA3Q5JRA6 1907 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 IGKV6D-21A0A0A0MT36 114 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 PNMA6FA0A0J9YX94 578 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 C4orf47A7E2U8 309 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 K7ESF4 209 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 NRP1O14786 923 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 CYTH3O43739 400 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 EFEMP2O95967 443 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 C1RP00736 705 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 SOD2P04179 222 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 CHRNB1P11230 501 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
DNMT1-222ENST00000590619 RAP1GAPP47736 663 aa7.37□□□□□ -1.23
DNMT1-222ENST00000590619 AFF1P51825 1210 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms