RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 PHLPP2Q6ZVD8 1323 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 ADGRA3Q8IWK6 1321 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
APOC1-206ENST00000590334 LRRIQ4A6NIV6 560 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 PPP1R37O75864 691 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 SMC2O95347 1197 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 CXCL10P02778 98 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 RAG1P15918 1043 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 LPIN1Q14693 890 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 SKOR2Q2VWA4 1001 aaPredicted RBP13.3□□□□□ -0.28
APOC1-206ENST00000590334 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 HERC4Q5GLZ8 1057 aaPredicted RBP13.3□□□□□ -0.28
APOC1-206ENST00000590334 TSHZ1Q6ZSZ6 1077 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 ZNF720Q7Z2F6 126 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 ZBTB8OSQ8IWT0 167 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 DPF3Q92784 378 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 PPP1R16BQ96T49 567 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 TMEM134Q9H6X4 195 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 PRKAG2Q9UGJ0 569 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
APOC1-206ENST00000590334 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 SLC16A4O15374 487 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 NBNO60934 754 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 CCL23P55773 120 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 GTF2BQ00403 316 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 MBTD1Q05BQ5 628 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 ALCAMQ13740 583 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 CAMK4Q16566 473 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 HAUS6Q7Z4H7 955 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 TET1Q8NFU7 2136 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 SMARCE1Q969G3 411 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 HVCN1Q96D96 273 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 SCLYQ96I15 445 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 KIFC3Q9BVG8 833 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 GTPBP4Q9BZE4 634 aaKnown RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 OSBPL7Q9BZF2 842 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 FZD8Q9H461 694 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 RMND1Q9NWS8 449 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 KIAA1468Q9P260 1216 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
APOC1-206ENST00000590334 NR2E3Q9Y5X4 410 aa13.29□□□□□ -0.28
APOC1-206ENST00000590334 K7ERI5 159 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 EIF3DO15371 548 aaKnown RBP eCLIP13.28□□□□□ -0.288e-8■□□□□ 9.1
APOC1-206ENST00000590334 GHRP10912 638 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 NMT1P30419 496 aaKnown RBP13.28□□□□□ -0.28
APOC1-206ENST00000590334 AMHR2Q16671 573 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 PLEKHG4Q58EX7 1191 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 FAM26FQ5R3K3 315 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 TAS1R3Q7RTX0 852 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 FAM228AQ86W67 206 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 TMEM199Q8N511 208 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
APOC1-206ENST00000590334 HPS3Q969F9 1004 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 PRIMPOLQ96LW4 560 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 FGFBP2Q9BYJ0 223 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 AGO3Q9H9G7 860 aaKnown RBP13.28□□□□□ -0.28
APOC1-206ENST00000590334 ERVK-5Q9HDB9 667 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 PRMT7Q9NVM4 692 aaPredicted RBP13.28□□□□□ -0.28
APOC1-206ENST00000590334 TMEM63CQ9P1W3 806 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
APOC1-206ENST00000590334 DENND3A2RUS2 1198 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 K7ENM7 598 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 ACKR2O00590 384 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 GPR182O15218 404 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 CSDE1O75534 798 aaKnown RBP13.27□□□□□ -0.29
APOC1-206ENST00000590334 RPS6KA5O75582 802 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 PFKMP08237 780 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.29
APOC1-206ENST00000590334 AXLP30530 894 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 CASP5P51878 434 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 STK4Q13043 487 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 MAPK6Q16659 721 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 COBLL1Q53SF7 1204 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 ZNF658Q5TYW1 1059 aaPredicted RBP13.27□□□□□ -0.29
APOC1-206ENST00000590334 TRIML1Q8N9V2 468 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 ZNF507Q8TCN5 953 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 BADQ92934 168 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 TBX20Q9UMR3 447 aa13.27□□□□□ -0.29
APOC1-206ENST00000590334 ST3GAL5Q9UNP4 418 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms