RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 A0A087WZ62 844 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 MSH4O15457 936 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 GALTP07902 379 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 SLC22A17Q8WUG5 538 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 PGBD4Q96DM1 585 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 RTP3Q9BQQ7 232 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 FDXACB1Q9BRP7 624 aaPredicted RBP17.13■□□□□ 0.33
ACTN4-211ENST00000589528 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 FAM105AQ9NUU6 356 aa17.13■□□□□ 0.33
ACTN4-211ENST00000589528 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 AOC1P19801 751 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 ID4P47928 161 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
ACTN4-211ENST00000589528 DRP2Q13474 957 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 PTPN14Q15678 1187 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 XKR3Q5GH77 459 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 CWF19L1Q69YN2 538 aaKnown RBP17.12■□□□□ 0.33
ACTN4-211ENST00000589528 ERMP1Q7Z2K6 904 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 GPR149Q86SP6 731 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 ZNF410Q86VK4 478 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 SIX5Q8N196 739 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 LENG9Q96B70 501 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 TRAIPQ9BWF2 469 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
ACTN4-211ENST00000589528 DNAJB4Q9UDY4 337 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 DUSP12Q9UNI6 340 aa17.12■□□□□ 0.33
ACTN4-211ENST00000589528 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
ACTN4-211ENST00000589528 SLC11A1P49279 550 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 TARBP2Q15633 366 aaKnown RBP17.11■□□□□ 0.33
ACTN4-211ENST00000589528 ELMSAN1Q6PJG2 1045 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 CCDC105Q8IYK2 499 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-211ENST00000589528 PHKBQ93100 1093 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 KCNK12Q9HB15 430 aa17.11■□□□□ 0.33
ACTN4-211ENST00000589528 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
ACTN4-211ENST00000589528 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 OFD1O75665 1012 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 GBP2P32456 591 aaPredicted RBP17.1■□□□□ 0.33
ACTN4-211ENST00000589528 USP11P51784 963 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 CLCN4P51793 760 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■■□□□ 12.5
ACTN4-211ENST00000589528 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 Q6ZUG5 572 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 BRF1Q92994 677 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 GJA10Q969M2 543 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 KLHL5Q96PQ7 755 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
ACTN4-211ENST00000589528 NIFKQ9BYG3 293 aaKnown RBP17.1■□□□□ 0.33
ACTN4-211ENST00000589528 VPS54Q9P1Q0 977 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 DPP7Q9UHL4 492 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 FAN1Q9Y2M0 1017 aa17.1■□□□□ 0.33
ACTN4-211ENST00000589528 DCHS1Q96JQ0 3298 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 TMEM150BA6NC51 233 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 MEIS3P2A8K0S8 358 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 C2CD2LO14523 706 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 PI15O43692 258 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 ALDH2P05091 517 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 URODP06132 367 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 NLRP5P59047 1200 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 C15orf39Q6ZRI6 1047 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 ZNF280BQ86YH2 543 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 DTWD2Q8NBA8 298 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 STAMQ92783 540 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 SLC26A6Q9BXS9 759 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 RSAD1Q9HA92 442 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 IGSF9Q9P2J2 1179 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 KANSL3Q9P2N6 904 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
ACTN4-211ENST00000589528 TDRD15B5MCY1 1934 aaKnown RBP17.08■□□□□ 0.33
ACTN4-211ENST00000589528 ZNF623O75123 536 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
ACTN4-211ENST00000589528 CPA1P15085 419 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 NPR3P17342 541 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 AK2P54819 239 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 KSR1Q8IVT5 923 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 TBCKQ8TEA7 893 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
ACTN4-211ENST00000589528 MAN1C1Q9NR34 630 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.32
ACTN4-211ENST00000589528 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 IGKV6-21A0A0C4DH24 114 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 MAFO75444 373 aaPredicted RBP17.07■□□□□ 0.32
ACTN4-211ENST00000589528 PSMD10O75832 226 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 ADH1AP07327 375 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 CFHP08603 1231 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
ACTN4-211ENST00000589528 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms