RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 SRGAP1Q7Z6B7 1085 aa16.11■□□□□ 0.17
CNN1-208ENST00000588935 ZBTB8OSQ8IWT0 167 aa16.11■□□□□ 0.17
CNN1-208ENST00000588935 CCDC65Q8IXS2 484 aa16.11■□□□□ 0.17
CNN1-208ENST00000588935 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.17
CNN1-208ENST00000588935 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
CNN1-208ENST00000588935 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
CNN1-208ENST00000588935 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
CNN1-208ENST00000588935 ZBBXA8MT70 800 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 GPR182O15218 404 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 GTPBP6O43824 516 aaPredicted RBP16.1■□□□□ 0.17
CNN1-208ENST00000588935 TRAK2O60296 914 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 CXCL10P02778 98 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 MCM4P33991 863 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 SMTNP53814 917 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 PNOCQ13519 176 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 TMEM132AQ24JP5 1023 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 PLEKHG4Q58EX7 1191 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 TMEM240Q5SV17 173 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 FAM178BQ8IXR5 827 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 ZNF710Q8N1W2 664 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 ERVK-5Q9HDB9 667 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 LARSQ9P2J5 1176 aaKnown RBP16.1■□□□□ 0.17
CNN1-208ENST00000588935 ADGRA3Q8IWK6 1321 aa16.1■□□□□ 0.17
CNN1-208ENST00000588935 K7ENM7 598 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 K7ERI5 159 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 ERLIN2O94905 339 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 MBTD1Q05BQ5 628 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 COASYQ13057 564 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 CAMK4Q16566 473 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 ZC2HC1CQ53FD0 456 aaPredicted RBP16.09■□□□□ 0.17
CNN1-208ENST00000588935 C9orf50Q5SZB4 431 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 CNKSR3Q6P9H4 555 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 CDR2LQ86X02 465 aaPredicted RBP16.09■□□□□ 0.17
CNN1-208ENST00000588935 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 CPB2Q96IY4 423 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 MRPL44Q9H9J2 332 aaKnown RBP16.09■□□□□ 0.17
CNN1-208ENST00000588935 C17orf75Q9HAS0 396 aa16.09■□□□□ 0.17
CNN1-208ENST00000588935 MKI67P46013 3256 aaKnown RBP16.08■□□□□ 0.17
CNN1-208ENST00000588935 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 B4GALT5O43286 388 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 PRKCBP05771 671 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 ACTN1P12814 892 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 GAP43P17677 238 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
CNN1-208ENST00000588935 ZNF131P52739 623 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 POU5F1BQ06416 359 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 IKBKEQ14164 716 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 POSTNQ15063 836 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 SHHQ15465 462 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 UNC13DQ70J99 1090 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 HAUS6Q7Z4H7 955 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 RTN4RL1Q86UN2 441 aaPredicted RBP16.08■□□□□ 0.16
CNN1-208ENST00000588935 SPIRE2Q8WWL2 714 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 GDF15Q99988 308 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 C2orf40Q9H1Z8 148 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 TMX1Q9H3N1 280 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 SQORQ9Y6N5 450 aa16.08■□□□□ 0.16
CNN1-208ENST00000588935 TTLL13PA6NNM8 815 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 MGEA5O60502 916 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 GCNT3O95395 438 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 RPN1P04843 607 aaKnown RBP16.07■□□□□ 0.16
CNN1-208ENST00000588935 ZSCAN20P17040 1043 aaPredicted RBP16.07■□□□□ 0.16
CNN1-208ENST00000588935 MAPK6Q16659 721 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 KMT5BQ4FZB7 885 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 CDCA2Q69YH5 1023 aaPredicted RBP16.07■□□□□ 0.16
CNN1-208ENST00000588935 ISM2Q6H9L7 571 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNN1-208ENST00000588935 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
CNN1-208ENST00000588935 TMEM161BQ8NDZ6 487 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 GPT2Q8TD30 523 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 ADAM2Q99965 735 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 NTPCRQ9BSD7 190 aaKnown RBP16.07■□□□□ 0.16
CNN1-208ENST00000588935 FGFBP2Q9BYJ0 223 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 SLC39A2Q9NP94 309 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 KCNG1Q9UIX4 513 aa16.07■□□□□ 0.16
CNN1-208ENST00000588935 PIN4Q9Y237 131 aaKnown RBP16.07■□□□□ 0.16
CNN1-208ENST00000588935 ENPP3O14638 875 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 KLRC4O43908 158 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 TSPAN1O60635 241 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 PRPF6O94906 941 aaKnown RBP16.06■□□□□ 0.16
CNN1-208ENST00000588935 UPP2O95045 317 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 EDN1P05305 212 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 PFKMP08237 780 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 MYBP10242 640 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 MAPTP10636 758 aaKnown RBP16.06■□□□□ 0.16
CNN1-208ENST00000588935 EFNA5P52803 228 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 NCBP1Q09161 790 aaKnown RBP16.06■□□□□ 0.16
CNN1-208ENST00000588935 DPYDQ12882 1025 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 STRN3Q13033 797 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
CNN1-208ENST00000588935 FAM117BQ6P1L5 589 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 PSRC1Q6PGN9 363 aaPredicted RBP16.06■□□□□ 0.16
CNN1-208ENST00000588935 TAS1R3Q7RTX0 852 aa16.06■□□□□ 0.16
CNN1-208ENST00000588935 TMCO2Q7Z6W1 182 aaPredicted RBP16.06■□□□□ 0.16
CNN1-208ENST00000588935 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms