RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 RAD51AP2Q09MP3 1159 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 DHX8Q14562 1220 aaKnown RBP22.36■■□□□ 1.17
DDX39A-207ENST00000588542 AMHR2Q16671 573 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 RRAGBQ5VZM2 374 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 Q7L0L9 218 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 TIPINQ9BVW5 301 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 PANK2Q9BZ23 570 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 CHST12Q9NRB3 414 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 AGPAT5Q9NUQ2 364 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 KCND2Q9NZV8 630 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 STK17AQ9UEE5 414 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 KIAA1671Q9BY89 1806 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 ADGRA3Q8IWK6 1321 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 TMEM265A0A087WTH1 108 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 NCLP19338 710 aaKnown RBP22.35■■□□□ 1.17
DDX39A-207ENST00000588542 HOXA11P31270 313 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-207ENST00000588542 GPBP1Q86WP2 473 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 NPAS4Q8IUM7 802 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 SPATA32Q96LK8 384 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 DRC1Q96MC2 740 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 RC3H2Q9HBD1 1191 aaKnown RBP22.35■■□□□ 1.17
DDX39A-207ENST00000588542 PIN4Q9Y237 131 aaKnown RBP22.35■■□□□ 1.17
DDX39A-207ENST00000588542 INSL6Q9Y581 213 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 TRANK1O15050 2925 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 MYO9BQ13459 2157 aa22.35■■□□□ 1.17
DDX39A-207ENST00000588542 SFI1A8K8P3 1242 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 INO80B-WBP1J3KQ70 363 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 TSPAN1O60635 241 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 PPP2R5AQ15172 486 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 PCBP1Q15365 356 aaKnown RBP eCLIP22.34■■□□□ 1.17
DDX39A-207ENST00000588542 CCDC73Q6ZRK6 1079 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 SP7Q8TDD2 431 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-207ENST00000588542 ZNF689Q96CS4 500 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-207ENST00000588542 IFT74Q96LB3 600 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 TRAIPQ9BWF2 469 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 SEMA6BQ9H3T3 888 aa22.34■■□□□ 1.17
DDX39A-207ENST00000588542 RALGAPA2Q2PPJ7 1873 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 DGKIO75912 1065 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 NPTX2P47972 431 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 PEX3P56589 373 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 CACNB1Q02641 598 aaPredicted RBP22.33■■□□□ 1.17
DDX39A-207ENST00000588542 E2F4Q16254 413 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 ZNF697Q5TEC3 545 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 RESP18Q5W5W9 173 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 PDILTQ8N807 584 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 REEP2Q9BRK0 252 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 KIFC3Q9BVG8 833 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 CCDC113Q9H0I3 377 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 FZD8Q9H461 694 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 ZNF576Q9H609 170 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 SLC28A3Q9HAS3 691 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 DACT1Q9NYF0 836 aa22.33■■□□□ 1.17
DDX39A-207ENST00000588542 A0A0U1RQF3 1178 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 STAG3L1P0CL83 205 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 STAT6P42226 847 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 TAP1Q03518 808 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 GIT2Q14161 759 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 FAM187BQ17R55 369 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 PPP4R3CPQ6ZMV5 832 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 SPRED2Q7Z698 418 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 ECHDC2Q86YB7 292 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 ZBTB8OSQ8IWT0 167 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 DEFB123Q8N688 67 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 DEPTORQ8TB45 409 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 YME1L1Q96TA2 773 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 SCAND2PQ9GZW5 306 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-207ENST00000588542 C2orf40Q9H1Z8 148 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 ELAC1Q9H777 363 aaKnown RBP22.32■■□□□ 1.16
DDX39A-207ENST00000588542 C17orf75Q9HAS0 396 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 TMEM161AQ9NX61 479 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 ODF2LQ9ULJ1 636 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-207ENST00000588542 PCDHB7Q9Y5E2 793 aa22.32■■□□□ 1.16
DDX39A-207ENST00000588542 B4GALT5O43286 388 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 ERLIN2O94905 339 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 EDN1P05305 212 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 ATF7P17544 494 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-207ENST00000588542 ARF4P18085 180 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-207ENST00000588542 IBSPP21815 317 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-207ENST00000588542 AXLP30530 894 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 GATMP50440 423 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 UBXN11Q5T124 520 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 PPP2R2DQ66LE6 453 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 TWF2Q6IBS0 349 aaKnown RBP22.31■■□□□ 1.16
DDX39A-207ENST00000588542 ZNF598Q86UK7 904 aaKnown RBP22.31■■□□□ 1.16
DDX39A-207ENST00000588542 CPB2Q96IY4 423 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 FAM161BQ96MY7 647 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 NTPCRQ9BSD7 190 aaKnown RBP22.31■■□□□ 1.16
DDX39A-207ENST00000588542 RNF19AQ9NV58 838 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 LRFN2Q9ULH4 789 aa22.31■■□□□ 1.16
DDX39A-207ENST00000588542 LINC01553A4QN01 128 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 MYMKA6NI61 221 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 TTLL13PA6NNM8 815 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 PLS3P13797 630 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 ZNF131P52739 623 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 DMP1Q13316 513 aaPredicted RBP22.3■■□□□ 1.16
DDX39A-207ENST00000588542 ADALQ6DHV7 355 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 SV2BQ7L1I2 683 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 SPIRE2Q8WWL2 714 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 PRIMPOLQ96LW4 560 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms