RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 POTEGQ6S5H5 508 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ADGRD2Q7Z7M1 963 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 MICAL1Q8TDZ2 1067 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 POLD4Q9HCU8 107 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 GPRC5CQ9NQ84 441 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 GAS2O43903 313 aaKnown RBP22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 FGF18O76093 207 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 GLRA2P23416 452 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 HOXA11P31270 313 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ERVFC1P60507 584 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ORC2Q13416 577 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 RBM23Q86U06 439 aaKnown RBP22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ERMNQ8TAM6 284 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 NACC1Q96RE7 527 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 POLR3FQ9H1D9 316 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 FAM105AQ9NUU6 356 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 SMC3Q9UQE7 1217 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 KIF3AQ9Y496 699 aa22.29■■□□□ 1.16
TRAPPC6A-203ENST00000587818 H3BQV1 296 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 TNFRSF10AO00220 468 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 LINC01565O15544 149 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 RPA1P27694 616 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 CCT6AP40227 531 aaKnown RBP22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 MCM2P49736 904 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PTENP60484 403 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 CAPSQ13938 189 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 MXD4Q14582 209 aaPredicted RBP22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 IL17AQ16552 155 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 LEXMQ3ZCV2 418 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 UBXN11Q5T124 520 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 KCNT2Q6UVM3 1135 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PABPC5Q96DU9 382 aaKnown RBP22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 AGPAT5Q9NUQ2 364 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 LRWD1Q9UFC0 647 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 INPP5FQ9Y2H2 1132 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PCDHB2Q9Y5E7 798 aa22.28■■□□□ 1.16
TRAPPC6A-203ENST00000587818 NT5C1B-RDH14C9J2C7 533 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 INO80B-WBP1J3KQ70 363 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 LAG3P18627 525 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 LTBRP36941 435 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 DLX2Q07687 328 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 CLUL1Q15846 466 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 CPB2Q96IY4 423 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 TRAIPQ9BWF2 469 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 BACH2Q9BYV9 841 aa22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 DBR1Q9UK59 544 aaKnown RBP22.27■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PP2D1A8MPX8 630 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PER2O15055 1255 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ZNF623O75123 536 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 OFD1O75665 1012 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 CDC25AP30304 524 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 FXR2P51116 673 aaKnown RBP eCLIP22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 TFDP1Q14186 410 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 LARP1BQ659C4 914 aaKnown RBP22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PADI6Q6TGC4 694 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 LRRC43Q8N309 656 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 KIAA1024Q9UPX6 916 aa22.26■■□□□ 1.15
TRAPPC6A-203ENST00000587818 XIRP2A4UGR9 3374 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 TSPAN1O60635 241 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 SKIP12755 728 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 IL9P15248 144 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 NRIP1P48552 1158 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 AFF1P51825 1210 aaKnown RBP22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ADAM15Q13444 863 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PTCRAQ6ISU1 281 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ZNF558Q96NG5 402 aa22.25■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ARHGEF35A5YM69 484 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ERLIN2O94905 339 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 BCAR1P56945 870 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 MBTD1Q05BQ5 628 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PDIA5Q14554 519 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 COL19A1Q14993 1142 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 AGMOQ6ZNB7 445 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 MRPL10Q7Z7H8 261 aaKnown RBP22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 CDR2LQ86X02 465 aaPredicted RBP22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 MRPS27Q92552 414 aaKnown RBP22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PGBD4Q96DM1 585 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 EIF2AQ9BY44 585 aaKnown RBP22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 TLR9Q9NR96 1032 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 SPG21Q9NZD8 308 aa22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.24■■□□□ 1.15
TRAPPC6A-203ENST00000587818 LRRIQ4A6NIV6 560 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 B4GALT5O43286 388 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 CYP11B2P19099 503 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 RAB27AP51159 221 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PLCB3Q01970 1234 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 UBE3AQ05086 875 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 POU5F1BQ06416 359 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 AMHR2Q16671 573 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 CSPP1Q1MSJ5 1256 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 NOMO2Q5JPE7 1267 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PLPP4Q5VZY2 271 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 GLB1LQ6UWU2 654 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 IFNLR1Q8IU57 520 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 SMG8Q8ND04 991 aaKnown RBP22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 SNX29Q8TEQ0 813 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 BSNDQ8WZ55 320 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 GBP3Q9H0R5 595 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms