RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 COPB2P35606 906 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 PSMC4P43686 418 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 RNF144AP50876 292 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
SDF2-206ENST00000587788 IRX3P78415 501 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 ARHGAP4P98171 946 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 TBC1D8BQ0IIM8 1120 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 MEA1Q16626 185 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 WHAMMP3Q1A5X7 153 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 FAM110CQ1W6H9 321 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 Q4G0T1 1027 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 ANKRD40Q6AI12 368 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 XRRA1Q6P2D8 792 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 C16orf46Q6P387 395 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 FBXO46Q6PJ61 603 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 RAD9BQ6WBX8 426 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 MYOCDQ8IZQ8 938 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 CPLX3Q8WVH0 158 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 GOLGA1Q92805 767 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 CNOT6LQ96LI5 555 aaKnown RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 CEP63Q96MT8 703 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 PNMA5Q96PV4 448 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 DUSP9Q99956 384 aaKnown RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 NOC4LQ9BVI4 516 aaKnown RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 TANGO6Q9C0B7 1094 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 SAP130Q9H0E3 1048 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 ZNF395Q9H8N7 513 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 KCNMB3Q9NPA1 279 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 BLOC1S4Q9NUP1 217 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 FBXO28Q9NVF7 368 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 TMEM260Q9NX78 707 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 DDX41Q9UJV9 622 aaKnown RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 CDC23Q9UJX2 597 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 PTPN22Q9Y2R2 807 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 MRFAP1Q9Y605 127 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 EPN1Q9Y6I3 576 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 TTC26A0AVF1 554 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 SERTM1A2A2V5 107 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 MYMKA6NI61 221 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 CCDC85CA6NKD9 419 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 B4DLN1 442 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 EIF3CLB5ME19 914 aaKnown RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 PES1O00541 588 aaKnown RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 KRT86O43790 486 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 SLC37A4O43826 429 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 PPP1R11O60927 126 aaPredicted RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 TDP2O95551 362 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 SLC25A27O95847 323 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 MUTP22033 750 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 CIITAP33076 1130 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 ZNF76P36508 570 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 SREBF1P36956 1147 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 STAT3P40763 770 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 FKBP3Q00688 224 aaKnown RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 GHRHRQ02643 423 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 PRKCZQ05513 592 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 PPP2R3AQ06190 1150 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 EHHADHQ08426 723 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 GOLGA8FQ08AF8 430 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 GOLGA8DPQ0D2H9 430 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 STK4Q13043 487 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 MTMR3Q13615 1198 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 ELF2Q15723 593 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 MAN2A1Q16706 1144 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 VWA3BQ502W6 1294 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 SH3PXD2AQ5TCZ1 1133 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 TMCO3Q6UWJ1 677 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 LBX2Q6XYB7 198 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 SRGAP1Q7Z6B7 1085 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 CREBRFQ8IUR6 639 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 GLYCTKQ8IVS8 523 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 CHST13Q8NET6 341 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 RHBDD1Q8TEB9 315 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 UBE2Q2Q8WVN8 375 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 HAS1Q92839 578 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 WDR24Q96S15 920 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 PLIN2Q99541 437 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 EIF3CQ99613 913 aaKnown RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 NAPGQ99747 312 aaPredicted RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 PORCNQ9H237 461 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 LUC7LQ9NQ29 371 aaKnown RBP6.32□□□□□ -1.4
SDF2-206ENST00000587788 BTBD7Q9P203 1132 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 MORF4L1Q9UBU8 362 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 FBXO40Q9UH90 709 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 FAM184BQ9ULE4 1060 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 CCPG1Q9ULG6 757 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 MAPK8IP1Q9UQF2 711 aa6.32□□□□□ -1.4
SDF2-206ENST00000587788 TRIM49BA6NDI0 452 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 SPATA31C2B4DYI2 1134 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 USO1O60763 962 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 STAM2O75886 525 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 CFBP00751 764 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 MCM3P25205 808 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 NOS2P35228 1153 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms