RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 FAM86B1E9PN63 330 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 C2CD2LO14523 706 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 PSAPP07602 524 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 FAM86B2P0C5J1 330 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 PHKA2P46019 1235 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 AP3B2Q13367 1082 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 NOMO2Q5JPE7 1267 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 TWF2Q6IBS0 349 aaKnown RBP9.66□□□□□ -0.86
SDF2-204ENST00000587338 PHLDB3Q6NSJ2 640 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 ZNF746Q6NUN9 644 aaPredicted RBP9.66□□□□□ -0.86
SDF2-204ENST00000587338 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 NIPA1Q7RTP0 329 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 MICU3Q86XE3 530 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 TMTC2Q8N394 836 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 RSPH1Q8WYR4 309 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 STAMQ92783 540 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 FAM167AQ96KS9 214 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 MYADMQ96S97 322 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 ZNF577Q9BSK1 485 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 FOXQ1Q9C009 403 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 WDR6Q9NNW5 1121 aaKnown RBP9.66□□□□□ -0.86
SDF2-204ENST00000587338 MRPL17Q9NRX2 175 aaKnown RBP9.66□□□□□ -0.86
SDF2-204ENST00000587338 DLGAP2Q9P1A6 1054 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 EPS15L1Q9UBC2 864 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 SLC12A7Q9Y666 1083 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 CEP295Q9C0D2 2601 aa9.66□□□□□ -0.86
SDF2-204ENST00000587338 CNTNAP5Q8WYK1 1306 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 MYH9P35579 1960 aaKnown RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 CCDC195A0A1B0GUA6 201 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 MEIS3P2A8K0S8 358 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 INPPL1O15357 1258 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 B4GALT3O60512 393 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 LRRN2O75325 713 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 OATP04181 439 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 MCM5P33992 734 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 AK2P54819 239 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 ELMSAN1Q6PJG2 1045 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 DCLRE1AQ6PJP8 1040 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 ZNF280BQ86YH2 543 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 SMAP1Q8IYB5 467 aaPredicted RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 FANCBQ8NB91 859 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 SUMF1Q8NBK3 374 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 ST13P5Q8NFI4 369 aaPredicted RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 CMASQ8NFW8 434 aaPredicted RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 PJA1Q8NG27 643 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 SMG7Q92540 1137 aaKnown RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 TMEM87BQ96K49 555 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 MTA3Q9BTC8 594 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 GCOM2Q9BZD3 368 aaPredicted RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 TBC1D22BQ9NU19 505 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 PIN4Q9Y237 131 aaKnown RBP9.65□□□□□ -0.86
SDF2-204ENST00000587338 PCDHA10Q9Y5I2 948 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 ATRXP46100 2492 aa9.65□□□□□ -0.86
SDF2-204ENST00000587338 BAHCC1Q9P281 2608 aa9.65□□□□□ -0.87
SDF2-204ENST00000587338 FANCMQ8IYD8 2048 aa9.65□□□□□ -0.87
SDF2-204ENST00000587338 IGLV3-22A0A075B6J6 115 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 SMCO2A6NFE2 343 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 RFPL2O75678 378 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 GLUD1P00367 558 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 URODP06132 367 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 ADH1AP07327 375 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 SKIP12755 728 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 GLULP15104 373 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 SFPQP23246 707 aaKnown RBP eCLIP9.64□□□□□ -0.87
SDF2-204ENST00000587338 CHMLP26374 656 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 LIFRP42702 1097 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 ATXN1P54253 815 aaKnown RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 SETQ01105 290 aaPredicted RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 PRKCEQ02156 737 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 DRP2Q13474 957 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 ST3GAL2Q16842 350 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 VARS2Q5ST30 1063 aaKnown RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 JAKMIP3Q5VZ66 844 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 GET4Q7L5D6 327 aaPredicted RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 URGCPQ8TCY9 931 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 LRRC2Q9BYS8 371 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 UPF2Q9HAU5 1272 aaKnown RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 CHST12Q9NRB3 414 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 NRBP2Q9NSY0 501 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 FAM105AQ9NUU6 356 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 SPATA6Q9NWH7 488 aaPredicted RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 STK39Q9UEW8 545 aa9.64□□□□□ -0.87
SDF2-204ENST00000587338 CDV3Q9UKY7 258 aaKnown RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 RBM8AQ9Y5S9 174 aaKnown RBP9.64□□□□□ -0.87
SDF2-204ENST00000587338 A0A087WZ62 844 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 WDR64B1ANS9 1081 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 SPTLC1O15269 473 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 TEX28O15482 410 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 LAMTOR5O43504 91 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 ZNF862O60290 1169 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 LILRB3O75022 631 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 OFD1O75665 1012 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 SPATA31D3P0C874 917 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 SDHBP21912 280 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
SDF2-204ENST00000587338 RAB27AP51159 221 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 HTR4Q13639 388 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms