RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PYM1Q9BRP8 204 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-202ENST00000585540 MRPL9Q9BYD2 267 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-202ENST00000585540 PRMT7Q9NVM4 692 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-202ENST00000585540 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
PRKCSH-202ENST00000585540 ODF2LQ9ULJ1 636 aa15.29■□□□□ 0.04
PRKCSH-202ENST00000585540 PIN4Q9Y237 131 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-202ENST00000585540 CNTNAP2Q9UHC6 1331 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 E9PMD0 336 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 UPP2O95045 317 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 SRGAP2CP0DJJ0 459 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 POU3F3P20264 500 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 NUCB2P80303 420 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 DMP1Q13316 513 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 MAPK6Q16659 721 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 CSPP1Q1MSJ5 1256 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 RINT1Q6NUQ1 792 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 ASAP3Q8TDY4 903 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 CLP1Q92989 425 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 UBN1Q9NPG3 1134 aa15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-202ENST00000585540 LINC01553A4QN01 128 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 LRRIQ4A6NIV6 560 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 INO80B-WBP1J3KQ70 363 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 MGEA5O60502 916 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 PLA2G4BP0C869 781 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 CDC25AP30304 524 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 SLC12A3P55017 1021 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 MBTD1Q05BQ5 628 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 BTG3Q14201 252 aaPredicted RBP15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 C1orf186Q6ZWK4 172 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 ECHDC2Q86YB7 292 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 KSR1Q8IVT5 923 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 DEPTORQ8TB45 409 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 LARP4BQ92615 738 aaKnown RBP15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 RAD54LQ92698 747 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 CHAMP1Q96JM3 812 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 CUEDC2Q9H467 287 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 AAASQ9NRG9 546 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 FAM105AQ9NUU6 356 aa15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 LARSQ9P2J5 1176 aaKnown RBP15.27■□□□□ 0.04
PRKCSH-202ENST00000585540 C5orf67F2Z3F1 127 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 CUTAO60888 179 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 SMTNP53814 917 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 KRT85P78386 507 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 GRIN1Q05586 938 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 ZRSR1Q15695 479 aaKnown RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 FAM117BQ6P1L5 589 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 LRRC43Q8N309 656 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 SPIRE2Q8WWL2 714 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 SYMPKQ92797 1274 aaKnown RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 P2RX5Q93086 422 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 CDX2Q99626 313 aaPredicted RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 C11orf84Q9BUA3 381 aaPredicted RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 LRRC27Q9C0I9 530 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 LMAN2LQ9H0V9 348 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 FZD8Q9H461 694 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 TMEM134Q9H6X4 195 aa15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 TFIP11Q9UBB9 837 aaKnown RBP15.26■□□□□ 0.03
PRKCSH-202ENST00000585540 N4BP3O15049 544 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 TSPAN1O60635 241 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 MYOGP15173 224 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 FOSL2P15408 326 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 PLCG1P19174 1290 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 DNM1Q05193 864 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 GRIN2CQ14957 1233 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 RRAGBQ5VZM2 374 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 Q7L0L9 218 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 ZNF598Q86UK7 904 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 ZNF668Q96K58 619 aaPredicted RBP15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 ADPGKQ9BRR6 497 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 NTPCRQ9BSD7 190 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 GPRC5CQ9NQ84 441 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 NLRC5Q86WI3 1866 aa15.25■□□□□ 0.03
PRKCSH-202ENST00000585540 ACKR2O00590 384 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 HIP1RO75146 1068 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 PLS3P13797 630 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 LAG3P18627 525 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 AMHR2Q16671 573 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 PTPROQ16827 1216 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 SLC27A1Q6PCB7 646 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 MRPL10Q7Z7H8 261 aaKnown RBP15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 FBXO22Q8NEZ5 403 aa15.24■□□□□ 0.03
PRKCSH-202ENST00000585540 RUSC1Q9BVN2 902 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms