RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 STBD1O95210 358 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ATP1A1P05023 1023 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 HOXC6P09630 235 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RGS2P41220 211 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 HTRA3P83110 453 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 HSDL1Q3SXM5 330 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 XKR9Q5GH70 373 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FAM26FQ5R3K3 315 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ANO5Q75V66 913 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SEPT1Q8WYJ6 367 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ABHD16BQ9H3Z7 469 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PDE11AQ9HCR9 933 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ANKEF1Q9NU02 776 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 KCND2Q9NZV8 630 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MAFBQ9Y5Q3 323 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 IGKV6D-21A0A0A0MT36 114 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TBCAO75347 108 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TCF7P36402 384 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 NPEPPSP55786 919 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PRKCEQ02156 737 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ACVR2BQ13705 512 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 LRRC41Q15345 812 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GJC2Q5T442 439 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 OTUD6AQ7L8S5 288 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RNF10Q8N5U6 811 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GLIS3Q8NEA6 775 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GOLGA5Q8TBA6 731 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PCYT2Q99447 389 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GPR20Q99678 358 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PCDHA2Q9Y5H9 948 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ARID2Q68CP9 1835 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RPS6KA5O75582 802 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TCP1P17987 556 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GUCY2CP25092 1073 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PSMC4P43686 418 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 VEGFBP49765 207 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FKBP3Q00688 224 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CCL14Q16627 93 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SFR1Q86XK3 245 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MMGT1Q8N4V1 131 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CEP63Q96MT8 703 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FGFBP2Q9BYJ0 223 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RNF14Q9UBS8 474 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TRIM10Q9UDY6 481 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
CDK5RAP3-236ENST00000584991 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 H3BQF6 201 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FAM13AO94988 1023 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ATP4AP20648 1035 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 STAT5BP51692 787 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FCGRTP55899 365 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MARSP56192 900 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ARHGAP1Q07960 439 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PRAMEF19Q5SWL8 479 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MAEAQ7L5Y9 396 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ALS2CR12Q96Q35 445 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MMS19Q96T76 1030 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 APBA2Q99767 749 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 IFIH1Q9BYX4 1025 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PCDHA13Q9Y5I0 950 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 COL4A3BPQ9Y5P4 624 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ERICH4A6NGS2 130 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 HIP1RO75146 1068 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GH1P01241 217 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 XKR3Q5GH77 459 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FAM160B1Q5W0V3 765 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MYOCDQ8IZQ8 938 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MYCT1Q8N699 235 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CEP170P1Q96L14 293 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ODF2LQ9ULJ1 636 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ENC1O14682 589 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TRPA1O75762 1119 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 OATP04181 439 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GAP43P17677 238 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MAP2K2P36507 400 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 HNRNPH2P55795 449 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 LAMC2Q13753 1193 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TSPYL1Q9H0U9 437 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 AZI2Q9H6S1 392 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PARVGQ9HBI0 331 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FAM184BQ9ULE4 1060 aa16.34■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CLSTN1O94985 981 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms