RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 NRDE2Q9H7Z3 1164 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 DLGAP2Q9P1A6 1054 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 RALYQ9UKM9 306 aaKnown RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 CYP46A1Q9Y6A2 500 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 FANCMQ8IYD8 2048 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 CACNA1GO43497 2377 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 ACACBO00763 2458 aa11.52□□□□□ -0.56
GGA3-219ENST00000584550 GOLGA8AA7E2F4 631 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MEIS1O00470 390 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 ZBTB43O43298 467 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 SRFP11831 508 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 GNAQP50148 359 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.57
GGA3-219ENST00000584550 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 SGMS1Q86VZ5 419 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MAML2Q8IZL2 1156 aaPredicted RBP11.52□□□□□ -0.57
GGA3-219ENST00000584550 FANCBQ8NB91 859 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 NLRP7Q8WX94 980 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 CHAMP1Q96JM3 812 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MAP7D2Q96T17 732 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MAP3K14Q99558 947 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
GGA3-219ENST00000584550 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MAN1C1Q9NR34 630 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 ARHGEF3Q9NR81 526 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 TBC1D13Q9NVG8 400 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 CACNA1IQ9P0X4 2223 aa11.52□□□□□ -0.57
GGA3-219ENST00000584550 MYH9P35579 1960 aaKnown RBP11.52□□□□□ -0.57
GGA3-219ENST00000584550 DHX15O43143 795 aaKnown RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 B4GALT3O60512 393 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 RFPL2O75678 378 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 SPATA31D3P0C874 917 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 DARSP14868 501 aaKnown RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 SLC11A1P49279 550 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 GPC3P51654 580 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 RTN1Q16799 776 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 KIAA0319Q5VV43 1072 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 PHLDB3Q6NSJ2 640 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 DCLRE1AQ6PJP8 1040 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 C15orf39Q6ZRI6 1047 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 SPATA31D4Q6ZUB0 917 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 ZNF280BQ86YH2 543 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 WDR6Q9NNW5 1121 aaKnown RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 SPATA6Q9NWH7 488 aaPredicted RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 DACT1Q9NYF0 836 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 GABBR1Q9UBS5 961 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 CDV3Q9UKY7 258 aaKnown RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 MAFBQ9Y5Q3 323 aaPredicted RBP11.51□□□□□ -0.57
GGA3-219ENST00000584550 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
GGA3-219ENST00000584550 FAM86B1E9PN63 330 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 INPPL1O15357 1258 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 MAGEB2O15479 319 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 FAM86B2P0C5J1 330 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 TMOD1P28289 359 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 PHKA2P46019 1235 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 AK2P54819 239 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 NAPAP54920 295 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 CSTF1Q05048 431 aaKnown RBP11.5□□□□□ -0.57
GGA3-219ENST00000584550 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
GGA3-219ENST00000584550 C8orf34Q49A92 452 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 WWC2Q6AWC2 1192 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 TWF2Q6IBS0 349 aaKnown RBP11.5□□□□□ -0.57
GGA3-219ENST00000584550 TYW1BQ6NUM6 668 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 PLA2G4DQ86XP0 818 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 PJA1Q8NG27 643 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 STAMQ92783 540 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 ANO3Q9BYT9 981 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
GGA3-219ENST00000584550 EPS15L1Q9UBC2 864 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 SAMM50Q9Y512 469 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 CLUHO75153 1309 aa11.5□□□□□ -0.57
GGA3-219ENST00000584550 MAP1BP46821 2468 aaKnown RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 IPO5O00410 1097 aaKnown RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 LILRB3O75022 631 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 OFD1O75665 1012 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 DDHD2O94830 711 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 SDHBP21912 280 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 CDC27P30260 824 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 DRP2Q13474 957 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 GLB1LQ6UWU2 654 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 GET4Q7L5D6 327 aaPredicted RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 TAS1R1Q7RTX1 841 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 LINC01465Q8N7H1 131 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 ATRIPQ8WXE1 791 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 SMG7Q92540 1137 aaKnown RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 ZNF577Q9BSK1 485 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 RPP25Q9BUL9 199 aaKnown RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 PIDD1Q9HB75 910 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms