RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 GLIS2Q9BZE0 524 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PPCSQ9HAB8 311 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 STIM2Q9P246 746 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CNOT7Q9UIV1 285 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 LZTS1Q9Y250 596 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAM169AQ9Y6X4 670 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PTGER2P43116 358 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NOVP48745 357 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 QRICH1Q2TAL8 776 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TATDN1Q6P1N9 297 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ADAT2Q7Z6V5 191 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAM114A1Q8IWE2 563 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CYP2W1Q8TAV3 490 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAM151AQ8WW52 585 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TBC1D20Q96BZ9 403 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ALS2CR12Q96Q35 445 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ZMAT5Q9UDW3 170 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 A0A087X0T9 212 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 H0Y3Z8 333 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MED24O75448 989 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ATG7O95352 703 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAM228BP0C875 321 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NNTQ13423 1086 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 DGKZQ13574 1117 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 HLTFQ14527 1009 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TNIP1Q15025 636 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ACBD5Q5T8D3 534 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 WDR75Q8IWA0 830 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 BAP1Q92560 729 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SH3GL3Q99963 347 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CUEDC2Q9H467 287 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 VIPAS39Q9H9C1 493 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MRGBPQ9NV56 204 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 DCAF16Q9NXF7 216 aa12.56□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ZBTB5O15062 677 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ZSCAN9O15535 394 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 HSF2BPO75031 334 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PDCD2Q16342 344 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TMEM266Q2M3C6 531 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TRIM7Q9C029 511 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PCDH12Q9NPG4 1184 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PANK4Q9NVE7 773 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 EBAG9O00559 213 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NDUFAB1O14561 156 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ATP2C2O75185 946 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RECKO95980 971 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MYL1P05976 194 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MCM3P25205 808 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NT5C2P49902 561 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PRELPP51888 382 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TUBB4BP68371 445 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CYP4A11Q02928 519 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MAN2A1Q16706 1144 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TMEM119Q4V9L6 283 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KCNN1Q92952 543 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 IWS1Q96ST2 819 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TRIM31Q9BZY9 425 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PCDHA12Q9UN75 941 aa12.55□□□□□ -0.4
CDK5RAP3-231ENST00000584063 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TSPAN7P41732 249 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CLK2P49760 499 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NOC3LQ8WTT2 800 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SFI1A8K8P3 1242 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RSPH10B2B2RC85 870 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NOL4O94818 638 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TUBBP07437 444 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RSPH10BP0C881 870 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 BMP3P12645 472 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 UBXN2AP68543 259 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 DBN1Q16643 649 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 HGSNATQ68CP4 663 aa12.54□□□□□ -0.4
CDK5RAP3-231ENST00000584063 GPBP1Q86WP2 473 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms