RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
BDNF-219ENST00000584049 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 SEL1L2Q5TEA6 688 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 TTBK2Q6IQ55 1244 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
BDNF-219ENST00000584049 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 IFT74Q96LB3 600 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 SEL1LQ9UBV2 794 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 ALG6Q9Y672 507 aa9.38□□□□□ -0.91
BDNF-219ENST00000584049 FOSP01100 380 aaPredicted RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 ABCB4P21439 1286 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 CCND1P24385 295 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 PPARDQ03181 441 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 TBC1D16Q8TBP0 767 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 ANKRD27Q96NW4 1050 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 SERPINB12Q96P63 405 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 INTS2Q9H0H0 1204 aaKnown RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 WNT8AQ9H1J5 351 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 RARAP10276 462 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 CIITAP33076 1130 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 QRICH1Q2TAL8 776 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 SLCO2A1Q92959 643 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 THAP2Q9H0W7 228 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 DMAC2Q9NW81 257 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 COG5Q9UP83 839 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 UBOX5O94941 541 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 GJB6O95452 261 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 CLTAP09496 248 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 BNIP1Q12981 228 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 ZNF211Q13398 564 aaPredicted RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 CTTNQ14247 550 aaKnown RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 MYBPC2Q14324 1141 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 TBC1D1Q86TI0 1168 aaPredicted RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 LENG9Q96B70 501 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 STAMBPL1Q96FJ0 436 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 AGPAT1Q99943 283 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 ABCF3Q9NUQ8 709 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
BDNF-219ENST00000584049 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
BDNF-219ENST00000584049 CLIC2O15247 247 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 SREBF1P36956 1147 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 NFIXQ14938 502 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 CCDC137Q6PK04 289 aaKnown RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 EPS8L3Q8TE67 593 aaKnown RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 DCAF4Q8WV16 495 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 NSMCE1Q8WV22 266 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 RUSC1Q9BVN2 902 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 AGAP1Q9UPQ3 857 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 SUGT1Q9Y2Z0 365 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 DAGLAQ9Y4D2 1042 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 RSPH10B2B2RC85 870 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 MEIS2O14770 477 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 WFS1O76024 890 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 FAM13AO94988 1023 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 RSPH10BP0C881 870 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 COPB2P35606 906 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 COILP38432 576 aaPredicted RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 PEX5P50542 639 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 MYL7Q01449 175 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 MYO1EQ12965 1108 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 ACCSLQ4AC99 568 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 BHMT2Q9H2M3 363 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 WHRNQ9P202 907 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 VAV3Q9UKW4 847 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 STRCQ7RTU9 1775 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 QSER1Q2KHR3 1735 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 MEIS1O00470 390 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 LIN7AO14910 233 aaPredicted RBP9.36□□□□□ -0.91
BDNF-219ENST00000584049 BCRP11274 1271 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 HSPA2P54652 639 aa9.36□□□□□ -0.91
BDNF-219ENST00000584049 EIF6P56537 245 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms