RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CXorf67Q86X51 503 aaPredicted RBP5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 OR14K1Q8NGZ2 314 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 LMBR1Q8WVP7 490 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 CEP89Q96ST8 783 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 VPS11Q9H270 941 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 TMPRSS11EQ9UL52 423 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 VWA7Q9Y334 891 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 MYPNQ86TC9 1320 aa5.39□□□□□ -1.55
PPP4R1-227ENST00000583988 PPM1GO15355 546 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 KDM1AO60341 852 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 OPHN1O60890 802 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 RAD17O75943 681 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 FSCN1Q16658 493 aaKnown RBP5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 INAVAQ3KP66 663 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 BRDTQ58F21 947 aaPredicted RBP5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 SSH1Q8WYL5 1049 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 ZNF747Q9BV97 191 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 PLA2G12BQ9BX93 195 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 ANO3Q9BYT9 981 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 MTG2Q9H4K7 406 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 VTA1Q9NP79 307 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 SRRDQ9UH36 339 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 SYNPO2Q9UMS6 1093 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 WASHC2AQ641Q2 1341 aa5.38□□□□□ -1.55
PPP4R1-227ENST00000583988 TRIM75PA6NK02 468 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 CFBP00751 764 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 PFKMP08237 780 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 HSP90B1P14625 803 aaKnown RBP5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 ACO1P21399 889 aaKnown RBP5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 GDF5P43026 501 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 MANFP55145 182 aaKnown RBP5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 KLF1Q13351 362 aaPredicted RBP5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 MTMR1Q13613 665 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 NFYCQ13952 458 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 ZBTB41Q5SVQ8 909 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 LYSMD2Q8IV50 215 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 OR5AN1Q8NGI8 311 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 PPP1R14CQ8TAE6 165 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 NKD2Q969F2 451 aaPredicted RBP5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 DYDC2Q96IM9 177 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 RAX2Q96IS3 184 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 SCAND2PQ9GZW5 306 aaPredicted RBP5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 OR10A2Q9H208 303 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 TESMINQ9Y4I5 508 aa5.37□□□□□ -1.55
PPP4R1-227ENST00000583988 A0A0A6YYK5 440 aaPredicted RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 ST20-MTHFSA0A0A6YYL1 179 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 H2AFYO75367 372 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 PCDH8O95206 1070 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 MTHFD2P13995 350 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 SESN2P58004 480 aaPredicted RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 EVA1CP58658 441 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 ITKQ08881 620 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 NRN1LQ496H8 165 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 KLHDC10Q6PID8 442 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 POLNQ7Z5Q5 900 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 SLC41A1Q8IVJ1 513 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 ZFPM1Q8IX07 1006 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 CMIPQ8IY22 773 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 Q8N1X5 172 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 STAG1Q8WVM7 1258 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 CFHR4Q92496 578 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 GFM2Q969S9 779 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 FERMT2Q96AC1 680 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 PAWRQ96IZ0 340 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 NOL10Q9BSC4 688 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 SOX7Q9BT81 388 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 ZNF341Q9BYN7 854 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 OSBPL6Q9BZF3 934 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 SLC13A1Q9BZW2 595 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 METTL14Q9HCE5 456 aaKnown RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 PRSS50Q9UI38 385 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 CTDP1Q9Y5B0 961 aaPredicted RBP5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 PPP2R3BQ9Y5P8 575 aa5.36□□□□□ -1.55
PPP4R1-227ENST00000583988 FZD7O75084 574 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 ENPP1P22413 925 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 MSX2P35548 267 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 RPS19P39019 145 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 MRPS9P82933 396 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 ADAM15Q13444 863 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 PITRM1Q5JRX3 1037 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 CDYL2Q8N8U2 506 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 COG1Q8WTW3 980 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 GAB3Q8WWW8 586 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 EDAQ92838 391 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 EXTL1Q92935 676 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 TMEM176AQ96HP8 235 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 HIST1H2AHQ96KK5 128 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 WDR92Q96MX6 357 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 HIST1H2AJQ99878 128 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 KRTAP17-1Q9BYP8 105 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 ASPSCR1Q9BZE9 553 aa5.35□□□□□ -1.55
PPP4R1-227ENST00000583988 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms