RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TMEM134Q9H6X4 195 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 IFT122Q9HBG6 1241 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 MAN1B1Q9UKM7 699 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 TBX21Q9UL17 535 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 CDY2AQ9Y6F7 541 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 UBE4BO95155 1302 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 TRIP11Q15643 1979 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 A0A087WZ62 844 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 PPP1R37O75864 691 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 KIF20AO95235 890 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 SELPP16109 830 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
CDRT1-207ENST00000583965 PPP1R2P41236 205 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 GTF2BQ00403 316 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 MORC3Q14149 939 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 ZSCAN23Q3MJ62 389 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 ZNF618Q5T7W0 954 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
CDRT1-207ENST00000583965 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 USP38Q8NB14 1042 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
CDRT1-207ENST00000583965 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
CDRT1-207ENST00000583965 STRA6Q9BX79 667 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 TMEM39AQ9NV64 488 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 TBC1D7Q9P0N9 293 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 ADGRA3Q8IWK6 1321 aa12.84□□□□□ -0.35
CDRT1-207ENST00000583965 DENND3A2RUS2 1198 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 K7ERI5 159 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 KIAA0355O15063 1070 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 GCNT3O95395 438 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 CHRNA1P02708 482 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 DARSP14868 501 aaKnown RBP12.83□□□□□ -0.36
CDRT1-207ENST00000583965 NMT1P30419 496 aaKnown RBP12.83□□□□□ -0.36
CDRT1-207ENST00000583965 STRN3Q13033 797 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 STK4Q13043 487 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 STIM1Q13586 685 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 MAPK6Q16659 721 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 FAM187BQ17R55 369 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 LRRC8DQ7L1W4 858 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 EPM2AIP1Q7L775 607 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-207ENST00000583965 KIAA0895Q8NCT3 520 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 PRIMPOLQ96LW4 560 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 OSMRQ99650 979 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 SLC39A2Q9NP94 309 aa12.83□□□□□ -0.36
CDRT1-207ENST00000583965 PRMT7Q9NVM4 692 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-207ENST00000583965 INO80B-WBP1J3KQ70 363 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 BIN1O00499 593 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 CTSHP09668 335 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 MYBP10242 640 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDRT1-207ENST00000583965 NLRP12P59046 1061 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 L1TD1Q5T7N2 865 aaKnown RBP12.82□□□□□ -0.36
CDRT1-207ENST00000583965 TRAF7Q6Q0C0 670 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 MYOCDQ8IZQ8 938 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 GUF1Q8N442 669 aaKnown RBP12.82□□□□□ -0.36
CDRT1-207ENST00000583965 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 ZNF507Q8TCN5 953 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 HPS3Q969F9 1004 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 ZNF668Q96K58 619 aaPredicted RBP12.82□□□□□ -0.36
CDRT1-207ENST00000583965 ACCSQ96QU6 501 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 PPP1R16BQ96T49 567 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
CDRT1-207ENST00000583965 FZD8Q9H461 694 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 CDHR5Q9HBB8 845 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 TBX20Q9UMR3 447 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 EXOC7Q9UPT5 735 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 GINS2Q9Y248 185 aa12.82□□□□□ -0.36
CDRT1-207ENST00000583965 FSD2A1L4K1 749 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 ACKR2O00590 384 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 ERLIN2O94905 339 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 TIMP1P01033 207 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 PRKCBP05771 671 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 IQCF3P0C7M6 154 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 CCDC192P0DO97 292 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 BMP6P22004 513 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 AXLP30530 894 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 RFC2P35250 354 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 CASP5P51878 434 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 NCBP1Q09161 790 aaKnown RBP12.81□□□□□ -0.36
CDRT1-207ENST00000583965 STX1AQ16623 288 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 ZC2HC1CQ53FD0 456 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-207ENST00000583965 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-207ENST00000583965 FBXO47Q5MNV8 452 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 TSHZ1Q6ZSZ6 1077 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 FGFBP2Q9BYJ0 223 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 TMEM206Q9H813 350 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms