RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PCDHB13Q9Y5F0 798 aa18.02■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PPP1R37O75864 691 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PRPF6O94906 941 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GCNT3O95395 438 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 VTNP04004 478 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PPP1R2P41236 205 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TFDP1Q14186 410 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ANO6Q4KMQ2 910 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ZC2HC1CQ53FD0 456 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 SLC39A5Q6ZMH5 540 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 C11orf57Q6ZUT1 292 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 MYOCDQ8IZQ8 938 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GUF1Q8N442 669 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 DEPTORQ8TB45 409 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 DHTKD1Q96HY7 919 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 DNAJC25Q9H1X3 360 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TRMT13Q9NUP7 481 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ARHGAP28Q9P2N2 729 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 DACH1Q9UI36 760 aa18.01■□□□□ 0.47
CDK5RAP3-228ENST00000583363 LTBP2Q14767 1821 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 H0YCG3 227 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 K7ENM7 598 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 EIF3DO15371 548 aaKnown RBP eCLIP18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GPR32O75388 356 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 SCP2P22307 547 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 HOXD13P35453 343 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GPC3P51654 580 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ATN1P54259 1190 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PTK7Q13308 1070 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 STIM1Q13586 685 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ALCAMQ13740 583 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 BMT2Q1RMZ1 405 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 STXBP4Q6ZWJ1 553 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 RNF149Q8NC42 400 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KIFC3Q9BVG8 833 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TRPV6Q9H1D0 765 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ADAMTS10Q9H324 1103 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TMEM134Q9H6X4 195 aa18■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ADGRA3Q8IWK6 1321 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 A0A087WZ62 844 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 LRRIQ4A6NIV6 560 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 B4GALT4O60513 344 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KIF20AO95235 890 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CAVIN2O95810 425 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 RPLP2P05387 115 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ERCC5P28715 1186 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NLRP11P59045 1033 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PTENP60484 403 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 C1orf53Q5VUE5 145 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GAS2L3Q86XJ1 694 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 IFNLR1Q8IU57 520 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 WNT8BQ93098 351 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NFKBIZQ9BYH8 718 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NAT10Q9H0A0 1025 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 IFT122Q9HBG6 1241 aa17.99■□□□□ 0.47
CDK5RAP3-228ENST00000583363 DENND3A2RUS2 1198 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CD4P01730 458 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ABCD1P33897 745 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 EFNA5P52803 228 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KCNA1Q09470 495 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 SNX17Q15036 470 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KNOP1Q1ED39 458 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 KLHL10Q6JEL2 608 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TAS1R3Q7RTX0 852 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 RSPH3Q86UC2 560 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 FAM126BQ8IXS8 530 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NELFBQ8WX92 580 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ZNF668Q96K58 619 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NLRP4Q96MN2 994 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 GUCD1Q96NT3 240 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 LBHD1Q9BQE6 289 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 BPIFA3Q9BQP9 254 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 C2orf40Q9H1Z8 148 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 SEMA6BQ9H3T3 888 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TBX20Q9UMR3 447 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NOD1Q9Y239 953 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 UBE4BO95155 1302 aa17.98■□□□□ 0.47
CDK5RAP3-228ENST00000583363 K7ERI5 159 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 PSMA7O14818 248 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 CCNE1P24864 410 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ZNF165P49910 485 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TMEM62Q0P6H9 643 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 TRIM71Q2Q1W2 868 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 FAM109BQ6ICB4 259 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 SRGAP1Q7Z6B7 1085 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ZBTB8OSQ8IWT0 167 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NELFCDQ8IXH7 590 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 NLRP7Q8WX94 980 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 DHX38Q92620 1227 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 ACCSQ96QU6 501 aa17.97■□□□□ 0.47
CDK5RAP3-228ENST00000583363 MED15Q96RN5 788 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms