RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 GAP43P17677 238 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ANGEL2Q5VTE6 544 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ARHGEF16Q5VV41 709 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 HAUS6Q7Z4H7 955 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZBTB10Q96DT7 871 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PCDHB18PQ96TA0 734 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 EDEM3Q9BZQ6 932 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 DPH5Q9H2P9 285 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ERVK-5Q9HDB9 667 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 HSPBP1Q9NZL4 362 aa11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CNOT7Q9UIV1 285 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NOC2LQ9Y3T9 749 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PFASO15067 1338 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 RPTORQ8N122 1335 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TARSL2A2RTX5 802 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SLC16A3O15427 465 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 H2AFZP0C0S5 128 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 HMGB2P26583 209 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZSCAN26Q16670 478 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SNRNP48Q6IEG0 339 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 H2AFVQ71UI9 128 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PEX26Q7Z412 305 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SLC47A2Q86VL8 602 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 USP38Q8NB14 1042 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SLC30A5Q8TAD4 765 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 KRT35Q92764 455 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PDCD2LQ9BRP1 358 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 GABBR1Q9UBS5 961 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NENFQ9UMX5 172 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 UBIAD1Q9Y5Z9 338 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 KIAA1217Q5T5P2 1943 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 VWA5AO00534 786 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 EIF3DO15371 548 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 P4HBP07237 508 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 DLATP10515 647 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 STAT1P42224 750 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 QARSP47897 775 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SLC39A4Q6P5W5 647 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 EEPD1Q7L9B9 569 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 RNF10Q8N5U6 811 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ALG3Q92685 438 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 STRA6Q9BX79 667 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TRIM7Q9C029 511 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TCRBV7S2A1N4TA0A589 114 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TTI1O43156 1089 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CYP26A1O43174 497 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 VAMP7P51809 220 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SP2Q02086 613 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CNTN2Q02246 1040 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PDE4CQ08493 712 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SF3A3Q12874 501 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■■■□□ 16.5
CDK5RAP3-225ENST00000582482 HLTFQ14527 1009 aaKnown RBP eCLIP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SWSAP1Q6NVH7 229 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 FAM83AQ86UY5 434 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PPM1KQ8N3J5 372 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NLGN2Q8NFZ4 835 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PIK3R5Q8WYR1 880 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 KREMEN1Q96MU8 473 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TMEM117Q9H0C3 514 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 METTL14Q9HCE5 456 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 APEX2Q9UBZ4 518 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TRIM66O15016 1216 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TBC1D12O60347 775 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 MMEP08473 750 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TMEM132BQ14DG7 1078 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 ZBTB41Q5SVQ8 909 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 FAM182AQ5T1J6 154 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 FOXR2Q6PJQ5 311 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 LRRC31Q6UY01 552 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NOP9Q86U38 636 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NT5DC3Q86UY8 548 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 FAM71BQ8TC56 605 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TAF4BQ92750 862 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 GLG1Q92896 1179 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TATDN2Q93075 761 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NUCKS1Q9H1E3 243 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 TCEAL9Q9UHQ7 104 aa11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-225ENST00000582482 DAPK3O43293 454 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PRLRP16471 622 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 GUCY2CP25092 1073 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 NPTX2P47972 431 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
CDK5RAP3-225ENST00000582482 SPOPLQ6IQ16 392 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms