RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 MAPK8IP1Q9UQF2 711 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 ATP11BQ9Y2G3 1177 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 TANC1Q9C0D5 1861 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 DENND3A2RUS2 1198 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 CCDC85CA6NKD9 419 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 K7ENM7 598 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TLR3O15455 904 aaKnown RBP10.5□□□□□ -0.73
RFFL-210ENST00000582308 PRPF6O94906 941 aaKnown RBP10.5□□□□□ -0.73
RFFL-210ENST00000582308 RPLP2P05387 115 aaKnown RBP10.5□□□□□ -0.73
RFFL-210ENST00000582308 CTSHP09668 335 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 IQCF3P0C7M6 154 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 CKBP12277 381 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 PHKA2P46019 1235 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 CRYBB1P53674 252 aaPredicted RBP10.5□□□□□ -0.73
RFFL-210ENST00000582308 GTF2BQ00403 316 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 MBTD1Q05BQ5 628 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 RBL2Q08999 1139 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 KCNA1Q09470 495 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 DPCR1Q3MIW9 517 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 COBLL1Q53SF7 1204 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 ZNF618Q5T7W0 954 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 ZNF410Q86VK4 478 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 ZNF710Q8N1W2 664 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 ZNF507Q8TCN5 953 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 OSMRQ99650 979 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 NFKBIZQ9BYH8 718 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 GTPBP4Q9BZE4 634 aaKnown RBP10.5□□□□□ -0.73
RFFL-210ENST00000582308 OSBPL7Q9BZF2 842 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 CCDC113Q9H0I3 377 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TMEM134Q9H6X4 195 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TBX20Q9UMR3 447 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 GINS2Q9Y248 185 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TRPV2Q9Y5S1 764 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TRIP11Q15643 1979 aa10.5□□□□□ -0.73
RFFL-210ENST00000582308 TTLL13PA6NNM8 815 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 H0YCG3 227 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 K7ERI5 159 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
RFFL-210ENST00000582308 CAND2O75155 1236 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 EDN1P05305 212 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 CCDC192P0DO97 292 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 DARSP14868 501 aaKnown RBP10.49□□□□□ -0.73
RFFL-210ENST00000582308 EIF4BP23588 611 aaKnown RBP10.49□□□□□ -0.73
RFFL-210ENST00000582308 EFNA5P52803 228 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 ALCAMQ13740 583 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 STX1AQ16623 288 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 BMT2Q1RMZ1 405 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 L1TD1Q5T7N2 865 aaKnown RBP10.49□□□□□ -0.73
RFFL-210ENST00000582308 SRGAP1Q7Z6B7 1085 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 ZBTB8OSQ8IWT0 167 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 MYOCDQ8IZQ8 938 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 ADSSL1Q8N142 457 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 GUF1Q8N442 669 aaKnown RBP10.49□□□□□ -0.73
RFFL-210ENST00000582308 MLKLQ8NB16 471 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 CAGE1Q8TC20 777 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 TMEM40Q8WWA1 233 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 SCLT1Q96NL6 688 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 NOC4LQ9BVI4 516 aaKnown RBP10.49□□□□□ -0.73
RFFL-210ENST00000582308 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
RFFL-210ENST00000582308 C2orf40Q9H1Z8 148 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 IKZF4Q9H2S9 585 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 FZD8Q9H461 694 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 ANO10Q9NW15 660 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 TBX21Q9UL17 535 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 USP20Q9Y2K6 914 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 UMODL1Q5DID0 1318 aa10.49□□□□□ -0.73
RFFL-210ENST00000582308 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 M0QZ92 97 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 PRKCBP05771 671 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 CLTBP09497 229 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 SCP2P22307 547 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 FGFR4P22455 802 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 ZNF445P59923 1031 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 BFSP2Q13515 415 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 MBTPS1Q14703 1052 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 GPNMBQ14956 572 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 AMHR2Q16671 573 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 FAM187BQ17R55 369 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 KNOP1Q1ED39 458 aaKnown RBP10.48□□□□□ -0.73
RFFL-210ENST00000582308 KLHL10Q6JEL2 608 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 LRSAM1Q6UWE0 723 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 C11orf57Q6ZUT1 292 aaPredicted RBP10.48□□□□□ -0.73
RFFL-210ENST00000582308 STXBP4Q6ZWJ1 553 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 NELFCDQ8IXH7 590 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 CCDC155Q8N6L0 562 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 ACCSQ96QU6 501 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 MED15Q96RN5 788 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 INO80BQ9C086 356 aaPredicted RBP10.48□□□□□ -0.73
RFFL-210ENST00000582308 KCTD10Q9H3F6 313 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 SEMA6BQ9H3T3 888 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 HIPK3Q9H422 1215 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 TMEM39AQ9NV64 488 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms