RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 PTCH2Q9Y6C5 1203 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 CENPVL1A0A0U1RR11 272 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 TRIM24O15164 1050 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 STC2O76061 302 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 LAG3P18627 525 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 NPEPPSP55786 919 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 TAP1Q03518 808 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 RD3Q7Z3Z2 195 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 APBB1IPQ7Z5R6 666 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 C16orf92Q96LL3 132 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 PRDM13Q9H4Q3 707 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 ZNF768Q9H5H4 540 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 NDOR1Q9UHB4 597 aa6.6□□□□□ -1.35
SMCHD1-207ENST00000581711 ERBB2P04626 1255 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 CDK4P11802 303 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 GYPEP15421 78 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 KRTAP10-9P60411 292 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 C2orf27AQ580R0 203 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 SLFN12LQ6IEE8 588 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 GSTCDQ8NEC7 633 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 FAM193BQ96PV7 902 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 DNAI1Q9UI46 699 aa6.59□□□□□ -1.35
SMCHD1-207ENST00000581711 LPXNO60711 386 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 APPP05067 770 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 ZBTB48P10074 688 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 ZEB1P37275 1124 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 FNTBP49356 437 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 SQSTM1Q13501 440 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 PAPD7Q5XG87 772 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 C2orf69Q8N8R5 385 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 JMYQ8N9B5 988 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 MYEOVQ96EZ4 313 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
SMCHD1-207ENST00000581711 DAPK3O43293 454 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 EFCAB14O75071 495 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 HNRNPLP14866 589 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 KIR2DL3P43628 341 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 USP14P54578 494 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 FAM214AQ32MH5 1076 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 BMP8AQ7Z5Y6 402 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 MAGEB10Q96LZ2 347 aaPredicted RBP6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 BOCQ9BWV1 1114 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 KCNH6Q9H252 994 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 SERHL2Q9H4I8 314 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 SFMBT1Q9UHJ3 866 aa6.57□□□□□ -1.36
SMCHD1-207ENST00000581711 SPATA31A6Q5VVP1 1343 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 AHRRA9YTQ3 701 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 TMEM177Q53S58 311 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 JAZF1Q86VZ6 243 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 SUPT20HQ8NEM7 779 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 SLC7A14Q8TBB6 771 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 RNPC3Q96LT9 517 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 SLC46A2Q9BY10 475 aa6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 EIF2B4Q9UI10 523 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 MRPL42Q9Y6G3 142 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-207ENST00000581711 POLR2AP24928 1970 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 UBA6A0AVT1 1052 aaPredicted RBP6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 MTSS1O43312 755 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 FAM189BP81408 668 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 ABHD17CQ6PCB6 329 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 OTOP1Q7RTM1 612 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 BHLHA9Q7RTU4 235 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 IGSF22Q8N9C0 903 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 ZSWIM2Q8NEG5 633 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 SCLYQ96I15 445 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 ANKFY1Q9P2R3 1169 aa6.55□□□□□ -1.36
SMCHD1-207ENST00000581711 TYRP1P17643 537 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 KCNA6P17658 529 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 ITGB6P18564 788 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 TTC38Q5R3I4 469 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 PRAMEF9Q5VWM5 478 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 FBXO42Q6P3S6 717 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 CPPED1Q9BRF8 314 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 WDR11Q9BZH6 1224 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 SYBUQ9NX95 663 aa6.54□□□□□ -1.36
SMCHD1-207ENST00000581711 PPP1R12AO14974 1030 aaPredicted RBP6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 KRT37O76014 449 aa6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 NPTXRO95502 500 aa6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 KIF11P52732 1056 aa6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 TRIM61Q5EBN2 209 aa6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 CCDC62Q6P9F0 684 aa6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 LCORLQ8N3X6 602 aa6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 CPEB1Q9BZB8 566 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-207ENST00000581711 TMEM200CA6NKL6 621 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 HOXA3O43365 443 aaPredicted RBP6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 RAPGEF3O95398 923 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 BCAR1P56945 870 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 METTL24Q5JXM2 366 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 EPHA10Q5JZY3 1008 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 IQSEC1Q6DN90 963 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms