RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 Q6YL49 198 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 CHST14Q8NCH0 376 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 DEPDC7Q96QD5 511 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 SNTG2Q9NY99 539 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 PTGFRNQ9P2B2 879 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 SORCS3Q9UPU3 1222 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 CCDC163A0A0D9SF12 145 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 M0R2C6 588 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 B3GALT2O43825 422 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 KRT37O76014 449 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 CFBP00751 764 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 PTX3P26022 381 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 FAM214AQ32MH5 1076 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 ESRP1Q6NXG1 681 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 ZCCHC8Q6NZY4 707 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 OLFML1Q6UWY5 402 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 ADGRG3Q86Y34 549 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 ARL8AQ96BM9 186 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 PDCD2LQ9BRP1 358 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 CPEB1Q9BZB8 566 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 OSBPL6Q9BZF3 934 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 RIOX1Q9H6W3 641 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 NCOA5Q9HCD5 579 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 DKK2Q9UBU2 259 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 ZNHIT2Q9UHR6 403 aa5.38□□□□□ -1.55
SMCHD1-206ENST00000581631 COL11A2P13942 1736 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 CYP17A1P05093 508 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 TYRP1P17643 537 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 HK1P19367 917 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 NPEPPSP55786 919 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 SYCE2Q6PIF2 218 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 ZSWIM2Q8NEG5 633 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 OR52N2Q8NGI0 321 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 CPT1CQ8TCG5 803 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 MYEOVQ96EZ4 313 aa5.37□□□□□ -1.55
SMCHD1-206ENST00000581631 TMEM200CA6NKL6 621 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 MASP2O00187 686 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 DAPK3O43293 454 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 GAAP10253 952 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 GNAT2P19087 354 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 ZEB1P37275 1124 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 FAM189BP81408 668 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 LILRA3Q8N6C8 439 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 KIAA1958Q8N8K9 716 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 TUBGCP5Q96RT8 1024 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 LSM14BQ9BX40 385 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 SLC46A2Q9BY10 475 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 KCNH6Q9H252 994 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 SYBUQ9NX95 663 aa5.36□□□□□ -1.55
SMCHD1-206ENST00000581631 INO80B-WBP1J3KQ70 363 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 HOXA3O43365 443 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 LPXNO60711 386 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 OPHN1O60890 802 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 APPP05067 770 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 ATXN1P54253 815 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 TAP1Q03518 808 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 TIGD2Q4W5G0 525 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 NME9Q86XW9 330 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 PIK3C3Q8NEB9 887 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 RPGRQ92834 1020 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 CLUHP3Q96NS8 147 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 DNAJC7Q99615 494 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 INO80BQ9C086 356 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 R3HDMLQ9H3Y0 253 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 ING3Q9NXR8 418 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 SAMD15Q9P1V8 674 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 NCDNQ9UBB6 729 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 CHST2Q9Y4C5 530 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 COX11Q9Y6N1 276 aa5.35□□□□□ -1.55
SMCHD1-206ENST00000581631 PTPDC1A2A3K4 754 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 PLD2O14939 933 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 SCAF4O95104 1147 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 ZNF37AP17032 561 aaPredicted RBP5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 ADCY2Q08462 1091 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 VPS72Q15906 364 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 CSRP2Q16527 193 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 C2orf27AQ580R0 203 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 NAALADL2Q58DX5 795 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 ZKSCAN2Q63HK3 967 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 DDX53Q86TM3 631 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 UNC5BQ8IZJ1 945 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 NAF1Q96HR8 494 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 MTG2Q9H4K7 406 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 PCIF1Q9H4Z3 704 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 ALG13Q9NP73 1137 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 PTCH2Q9Y6C5 1203 aa5.34□□□□□ -1.55
SMCHD1-206ENST00000581631 RECQL4O94761 1208 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 PRPF6O94906 941 aaKnown RBP5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 GYPEP15421 78 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 LAG3P18627 525 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 IGFALSP35858 605 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 RBL2Q08999 1139 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 KIAA1841Q6NSI8 718 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 DOK3Q7L591 496 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 GPRIN1Q7Z2K8 1008 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 ARHGEF19Q8IW93 802 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 ELF4Q99607 663 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms