RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 A0A087WZ62 844 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 K7ENM7 598 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 KIAA0355O15063 1070 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 GPR182O15218 404 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 SLC16A4O15374 487 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 KLRC4O43908 158 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 GCNT3O95395 438 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 SFPQP23246 707 aaKnown RBP eCLIP15.73■□□□□ 0.11
SKA2-205ENST00000580541 CASP1P29466 404 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 RFC2P35250 354 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 NCKAP1LP55160 1127 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 TMEM62Q0P6H9 643 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 TRIM71Q2Q1W2 868 aaKnown RBP15.73■□□□□ 0.11
SKA2-205ENST00000580541 ZNF618Q5T7W0 954 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 ZNF658Q5TYW1 1059 aaPredicted RBP15.73■□□□□ 0.11
SKA2-205ENST00000580541 LRRC8DQ7L1W4 858 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 PRIMPOLQ96LW4 560 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
SKA2-205ENST00000580541 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
SKA2-205ENST00000580541 TMEM206Q9H813 350 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 PRMT7Q9NVM4 692 aaPredicted RBP15.73■□□□□ 0.11
SKA2-205ENST00000580541 DACH1Q9UI36 760 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 NR2E3Q9Y5X4 410 aa15.73■□□□□ 0.11
SKA2-205ENST00000580541 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 EIF3DO15371 548 aaKnown RBP eCLIP15.72■□□□□ 0.11
SKA2-205ENST00000580541 ERLIN2O94905 339 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 TIMP1P01033 207 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 CHRNA1P02708 482 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 DARSP14868 501 aaKnown RBP15.72■□□□□ 0.11
SKA2-205ENST00000580541 RAG1P15918 1043 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 GTF2BQ00403 316 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 EHHADHQ08426 723 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 CDCA2Q69YH5 1023 aaPredicted RBP15.72■□□□□ 0.11
SKA2-205ENST00000580541 RBM43Q6ZSC3 357 aaKnown RBP15.72■□□□□ 0.11
SKA2-205ENST00000580541 APBB1IPQ7Z5R6 666 aaPredicted RBP15.72■□□□□ 0.11
SKA2-205ENST00000580541 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 TMEM161BQ8NDZ6 487 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 BSNDQ8WZ55 320 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 DHX38Q92620 1227 aaKnown RBP15.72■□□□□ 0.11
SKA2-205ENST00000580541 ACCSQ96QU6 501 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 IFT122Q9HBG6 1241 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
SKA2-205ENST00000580541 TMEM63CQ9P1W3 806 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 ARHGAP28Q9P2N2 729 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 TBX21Q9UL17 535 aa15.72■□□□□ 0.11
SKA2-205ENST00000580541 UBE4BO95155 1302 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 DENND3A2RUS2 1198 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 RPS6KA5O75582 802 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 CTSHP09668 335 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 IQCF3P0C7M6 154 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 AXLP30530 894 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 SNRPFP62306 86 aaKnown RBP15.71■□□□□ 0.11
SKA2-205ENST00000580541 HSP90AA2PQ14568 343 aaPredicted RBP15.71■□□□□ 0.11
SKA2-205ENST00000580541 FAM187BQ17R55 369 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 TMEM132AQ24JP5 1023 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 CT47A1Q5JQC4 288 aaPredicted RBP15.71■□□□□ 0.11
SKA2-205ENST00000580541 RPUSD2Q8IZ73 545 aaKnown RBP15.71■□□□□ 0.11
SKA2-205ENST00000580541 MYOCDQ8IZQ8 938 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 SYCP3Q8IZU3 236 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 MLKLQ8NB16 471 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 OSMRQ99650 979 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 SLC39A2Q9NP94 309 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 TBC1D7Q9P0N9 293 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 MAN1B1Q9UKM7 699 aa15.71■□□□□ 0.11
SKA2-205ENST00000580541 ACKR2O00590 384 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 NMT1P30419 496 aaKnown RBP15.7■□□□□ 0.1
SKA2-205ENST00000580541 MGAT3Q09327 533 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 MORC3Q14149 939 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 COBLL1Q53SF7 1204 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 TSHZ1Q6ZSZ6 1077 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 CATSPER4Q7RTX7 472 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 GOLGA5Q8TBA6 731 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 ZNF507Q8TCN5 953 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 ERCC4Q92889 916 aaPredicted RBP15.7■□□□□ 0.1
SKA2-205ENST00000580541 WNT8BQ93098 351 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 PPP1R16BQ96T49 567 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 MRPL4Q9BYD3 311 aaKnown RBP15.7■□□□□ 0.1
SKA2-205ENST00000580541 FZD8Q9H461 694 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 CHST12Q9NRB3 414 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 ANO10Q9NW15 660 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 CGNQ9P2M7 1197 aaKnown RBP15.7■□□□□ 0.1
SKA2-205ENST00000580541 TBX20Q9UMR3 447 aa15.7■□□□□ 0.1
SKA2-205ENST00000580541 BIN1O00499 593 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 PSMA7O14818 248 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 PRKCBP05771 671 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 PFKMP08237 780 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 CCDC192P0DO97 292 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 ZSCAN20P17040 1043 aaPredicted RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 NLRP12P59046 1061 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 STK4Q13043 487 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 PAK2Q13177 524 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 PRPF4BQ13523 1007 aaKnown RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 FBXO47Q5MNV8 452 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 SLFN12LQ6IEE8 588 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 MFSD5Q6N075 450 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 HS2ST1Q7LGA3 356 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 GUF1Q8N442 669 aaKnown RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 APBB2Q92870 758 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms