RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 RRAGBQ5VZM2 374 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 DEPTORQ8TB45 409 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 LRRC15Q8TF66 581 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 BSNDQ8WZ55 320 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 ZNF689Q96CS4 500 aaPredicted RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 CCDC51Q96ER9 411 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 YME1L1Q96TA2 773 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 ZNF576Q9H609 170 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 PRMT7Q9NVM4 692 aaPredicted RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 TMEM161AQ9NX61 479 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 KCNG1Q9UIX4 513 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 PCDHA7Q9UN72 937 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 PIN4Q9Y237 131 aaKnown RBP11.1□□□□□ -0.63
MKS1-208ENST00000579358 LAMA3Q16787 3333 aa11.1□□□□□ -0.63
MKS1-208ENST00000579358 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 HOXA2O43364 376 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 TSPAN1O60635 241 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 DGKIO75912 1065 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 UPP2O95045 317 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 MYOGP15173 224 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
MKS1-208ENST00000579358 ME1P48163 572 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 EFNA5P52803 228 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 NCBP1Q09161 790 aaKnown RBP11.09□□□□□ -0.63
MKS1-208ENST00000579358 DMP1Q13316 513 aaPredicted RBP11.09□□□□□ -0.63
MKS1-208ENST00000579358 MCM6Q14566 821 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 AMHR2Q16671 573 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 FAM187BQ17R55 369 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 FAM117BQ6P1L5 589 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 NOTUMQ6P988 496 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 GPBP1Q86WP2 473 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 ECHDC2Q86YB7 292 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 LEO1Q8WVC0 666 aaPredicted RBP11.09□□□□□ -0.63
MKS1-208ENST00000579358 RSPH1Q8WYR4 309 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 SPATA32Q96LK8 384 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 CUEDC2Q9H467 287 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 PCDHB7Q9Y5E2 793 aa11.09□□□□□ -0.63
MKS1-208ENST00000579358 MICAL3Q7RTP6 2002 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 A0A087X0B3 334 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 LCHNA4D1U4 455 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 EOMESO95936 686 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 PLS3P13797 630 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 SCP2P22307 547 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 HOXA11P31270 313 aaPredicted RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 STAT6P42226 847 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 NPTX2P47972 431 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 PEX3P56589 373 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 TAP1Q03518 808 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 MAPK6Q16659 721 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 ARSHQ5FYA8 562 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 TWF2Q6IBS0 349 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 Q7L0L9 218 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 CMTR2Q8IYT2 770 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 SPIRE2Q8WWL2 714 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 KCNN1Q92952 543 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 SAMD11Q96NU1 681 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 PYM1Q9BRP8 204 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 NTPCRQ9BSD7 190 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 CCDC113Q9H0I3 377 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 FZD8Q9H461 694 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 FAM105AQ9NUU6 356 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 MTMR10Q9NXD2 777 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 LARSQ9P2J5 1176 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 ARHGAP28Q9P2N2 729 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 RBM19Q9Y4C8 960 aaKnown RBP11.08□□□□□ -0.64
MKS1-208ENST00000579358 CNTNAP2Q9UHC6 1331 aa11.08□□□□□ -0.64
MKS1-208ENST00000579358 H0YCG3 227 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 ACKR2O00590 384 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 ZNF623O75123 536 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 ARHGEF15O94989 841 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 PRKCBP05771 671 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
MKS1-208ENST00000579358 ARF4P18085 180 aaPredicted RBP11.07□□□□□ -0.64
MKS1-208ENST00000579358 ZNF131P52739 623 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 SMTNP53814 917 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 E2F4Q16254 413 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 UBXN11Q5T124 520 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 RESP18Q5W5W9 173 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 ADALQ6DHV7 355 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 SV2BQ7L1I2 683 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 CNNM3Q8NE01 707 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
MKS1-208ENST00000579358 REEP2Q9BRK0 252 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 KIFC3Q9BVG8 833 aa11.07□□□□□ -0.64
MKS1-208ENST00000579358 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms