RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 MYL1P05976 194 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 IDEP14735 1019 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 GAP43P17677 238 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 ZNF131P52739 623 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 EFNA5P52803 228 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 SNW1Q13573 536 aaKnown RBP17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 CATSPER4Q7RTX7 472 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 CCDC65Q8IXS2 484 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 TIGD1Q96MW7 591 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 PANK4Q9NVE7 773 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 ARID2Q68CP9 1835 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 PHLPP2Q6ZVD8 1323 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 LOXHD1Q8IVV2 1947 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 K7ERI5 159 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 TRAK2O60296 914 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 BAIAP3O94812 1187 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 ZSCAN20P17040 1043 aaPredicted RBP17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 FGFR4P22455 802 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 ASIC1P78348 528 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 MAPK6Q16659 721 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 HERC4Q5GLZ8 1057 aaPredicted RBP17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 PRPF38BQ5VTL8 546 aaKnown RBP17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 CDCA2Q69YH5 1023 aaPredicted RBP17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 DNAH12Q6ZR08 3092 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 OTOP2Q7RTS6 562 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 SLC17A8Q8NDX2 589 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 TMEM134Q9H6X4 195 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 MINDY3Q9H8M7 445 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 SEL1LQ9UBV2 794 aa17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 HOOK1Q9UJC3 728 aaKnown RBP17.17■□□□□ 0.34
SLC6A4-205ENST00000579221 PVALEFA0A1B0GWK0 134 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 SLC16A4O15374 487 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 NR1I2O75469 434 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 ERLIN2O94905 339 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 MAPTP10636 758 aaKnown RBP17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 LIG1P18858 919 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 SCP2P22307 547 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 AXLP30530 894 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 MBTD1Q05BQ5 628 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 SHHQ15465 462 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 GRAMD1CQ8IYS0 662 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 BLZF1Q9H2G9 400 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 FZD8Q9H461 694 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 LMBRD1Q9NUN5 540 aa17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 PRMT7Q9NVM4 692 aaPredicted RBP17.16■□□□□ 0.34
SLC6A4-205ENST00000579221 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 ZBBXA8MT70 800 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 ENPP3O14638 875 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 KINO60870 393 aaKnown RBP17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 ABCD1P33897 745 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 CUL4BQ13620 913 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 FAM187BQ17R55 369 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 TCTN1Q2MV58 587 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 UNC13DQ70J99 1090 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 ELOA2Q8IYF1 753 aaPredicted RBP17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 PRIMPOLQ96LW4 560 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 KIFC3Q9BVG8 833 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 ARHGAP28Q9P2N2 729 aa17.15■□□□□ 0.34
SLC6A4-205ENST00000579221 LTBP2Q14767 1821 aa17.14■□□□□ 0.34
SLC6A4-205ENST00000579221 FRMD3A2A2Y4 597 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 DENND3A2RUS2 1198 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 PRKCBP05771 671 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 KCNJ6P48051 423 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 NCKAP1LP55160 1127 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 STRN3Q13033 797 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 HAUS6Q7Z4H7 955 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 SFR1Q86XK3 245 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 ADAM2Q99965 735 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 MRPL44Q9H9J2 332 aaKnown RBP17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 RGS18Q9NS28 235 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 C1orf112Q9NSG2 853 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
SLC6A4-205ENST00000579221 K7ENM7 598 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 ACKR2O00590 384 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 AMHP03971 560 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 CASP1P29466 404 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 NMT1P30419 496 aaKnown RBP17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 COASYQ13057 564 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 DSC3Q14574 896 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 TMEM132AQ24JP5 1023 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 ZNF720Q7Z2F6 126 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 RTN4RL1Q86UN2 441 aaPredicted RBP17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 TDHQ8IZJ6 230 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 CCDC113Q9H0I3 377 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms