RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 RLFQ13129 1914 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 LOC285556D6RIA3 1793 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 DNAJC25-GNG10A0A024R161 153 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 PJA2O43164 708 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 ZNF862O60290 1169 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 NOL4O94818 638 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
SKA2-204ENST00000578519 STBD1O95210 358 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 GGPS1O95749 300 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 ZBTB48P10074 688 aaPredicted RBP12.11□□□□□ -0.47
SKA2-204ENST00000578519 UBA1P22314 1058 aaKnown RBP12.11□□□□□ -0.47
SKA2-204ENST00000578519 PRKCIP41743 596 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 ARHGAP25P42331 645 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 EFNA5P52803 228 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 KCNA1Q09470 495 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 EMC2Q15006 297 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 SLC18A3Q16572 532 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 IER5Q5VY09 327 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 MOB2Q70IA6 237 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
SKA2-204ENST00000578519 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 LMBR1Q8WVP7 490 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 GOLGA1Q92805 767 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 RPGRIP1Q96KN7 1286 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
SKA2-204ENST00000578519 C2orf40Q9H1Z8 148 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 ZNF408Q9H9D4 720 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 ZNF215Q9UL58 517 aaPredicted RBP12.11□□□□□ -0.47
SKA2-204ENST00000578519 MRFAP1Q9Y605 127 aa12.11□□□□□ -0.47
SKA2-204ENST00000578519 CCL15-CCL14A0A0B4J2E2 113 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 ZNF233A6NK53 670 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 K7ERI5 159 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 PDHXO00330 501 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 ASAP2O43150 1006 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 SLC9A1P19634 815 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 CNGA1P29973 690 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 LIG4P49917 911 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 MCCD1P59942 119 aaPredicted RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 MOGSQ13724 837 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 TFDP1Q14186 410 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 MXD4Q14582 209 aaPredicted RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 CCL15Q16663 113 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 CELF3Q5SZQ8 465 aaKnown RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 SMYD5Q6GMV2 418 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 CCDC70Q6NSX1 233 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 DLK2Q6UY11 383 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 GPD1LQ8N335 351 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 POMGNT1Q8WZA1 660 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 GLG1Q92896 1179 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 WDR24Q96S15 920 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 INTS2Q9H0H0 1204 aaKnown RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 PORCNQ9H237 461 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 PCIF1Q9H4Z3 704 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 DHX33Q9H6R0 707 aaKnown RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 INTUQ9ULD6 942 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 DIS3Q9Y2L1 958 aaKnown RBP12.1□□□□□ -0.47
SKA2-204ENST00000578519 JRKLQ9Y4A0 524 aa12.1□□□□□ -0.47
SKA2-204ENST00000578519 WDR90Q96KV7 1748 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 POLR2AP24928 1970 aaKnown RBP12.09□□□□□ -0.47
SKA2-204ENST00000578519 GSTTP1A0A1W2PQM5 241 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 BTNL10A8MVZ5 291 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 EPHB6O15197 1021 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 HBP1O60381 514 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 LGR5O75473 907 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 MAPK4P31152 587 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 TCF7P36402 384 aaPredicted RBP12.09□□□□□ -0.47
SKA2-204ENST00000578519 MFAP3P55082 362 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
SKA2-204ENST00000578519 SP2Q02086 613 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 BMS1Q14692 1282 aaKnown RBP12.09□□□□□ -0.47
SKA2-204ENST00000578519 Q3C1V9 767 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 KRT39Q6A163 491 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 ZBTB8OSQ8IWT0 167 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 GPRC5CQ9NQ84 441 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 ARHGAP28Q9P2N2 729 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 APEX2Q9UBZ4 518 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 USP20Q9Y2K6 914 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 SAR1BQ9Y6B6 198 aa12.09□□□□□ -0.47
SKA2-204ENST00000578519 COL11A1P12107 1806 aaPredicted RBP12.09□□□□□ -0.47
SKA2-204ENST00000578519 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.47
SKA2-204ENST00000578519 CTAGE15A4D2H0 777 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 HNRNPDLO14979 420 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 NKRFO15226 690 aaKnown RBP eCLIP12.08□□□□□ -0.48
SKA2-204ENST00000578519 EXTL3O43909 919 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms