RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 REC8O95072 547 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 POU5F1BQ06416 359 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 PPP2R5CQ13362 524 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 IER5LQ5T953 404 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 LRRC71Q8N4P6 559 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 BRF1Q92994 677 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 HERC2P3Q9BVR0 1158 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 POMKQ9H5K3 350 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 CYP26B1Q9NR63 512 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 SEPT9Q9UHD8 586 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 C2CD4DB7Z1M9 353 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 CSPG5O95196 566 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 NLRP5P59047 1200 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 CREMQ03060 361 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 LLGL2Q6P1M3 1020 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 VPS52Q8N1B4 723 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 RTP3Q9BQQ7 232 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 AGPAT5Q9NUQ2 364 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 SUCLA2Q9P2R7 463 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 SNX14Q9Y5W7 946 aa12.61□□□□□ -0.39
SMARCE1-214ENST00000578112 M0R2N6 131 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 OFD1O75665 1012 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 GALTP07902 379 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 VCPP55072 806 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 ETNPPLQ8TBG4 499 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 TM6SF1Q9BZW5 370 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 NRDE2Q9H7Z3 1164 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 HCSTQ9UBK5 93 aa12.6□□□□□ -0.39
SMARCE1-214ENST00000578112 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 EDIL3O43854 480 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 GFRA3O60609 400 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 NCLP19338 710 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 UGCGQ16739 394 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 PPP4R3AQ6IN85 833 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 BLIDQ8IZY5 108 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 PTPN14Q15678 1187 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 MTERF2Q49AM1 385 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 CABP7Q86V35 215 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 STAMQ92783 540 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 DBR1Q9UK59 544 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 MUC6Q6W4X9 2439 aa12.59□□□□□ -0.39
SMARCE1-214ENST00000578112 VCANP13611 3396 aa12.58□□□□□ -0.39
SMARCE1-214ENST00000578112 CDKL5O76039 1030 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 P4HBP07237 508 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 QARSP47897 775 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 RARS2Q5T160 578 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 CCDC149Q6ZUS6 474 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 OTUD6AQ7L8S5 288 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 C4orf19Q8IY42 314 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 HACE1Q8IYU2 909 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 SLC7A3Q8WY07 619 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 KLHL5Q96PQ7 755 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 DHX33Q9H6R0 707 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 DUSP12Q9UNI6 340 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 PIN4Q9Y237 131 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 REV3LO60673 3130 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 A0A087WZ62 844 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 LILRB3O75022 631 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 XBP1P17861 261 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 RNF169Q8NCN4 708 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 SNX27Q96L92 541 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 FDXACB1Q9BRP7 624 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 RXFP1Q9HBX9 757 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 COL4A3BPQ9Y5P4 624 aa12.58□□□□□ -0.4
SMARCE1-214ENST00000578112 DDX11L8A8MPP1 907 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 ZC3H11AO75152 810 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 SOD2P04179 222 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 ALDH2P05091 517 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 TDGQ13569 410 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms