RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 PPIGQ13427 754 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCDC40-213ENST00000574933 FAM187BQ17R55 369 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 ODR4Q5SWX8 454 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 MYCT1Q8N699 235 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 SPATA20Q8TB22 786 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 ZNF668Q96K58 619 aaPredicted RBP20.07■□□□□ 0.8
CCDC40-213ENST00000574933 BLZF1Q9H2G9 400 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 TMEM134Q9H6X4 195 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 MINDY3Q9H8M7 445 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 AGO3Q9H9G7 860 aaKnown RBP20.07■□□□□ 0.8
CCDC40-213ENST00000574933 HOOK1Q9UJC3 728 aaKnown RBP20.07■□□□□ 0.8
CCDC40-213ENST00000574933 GINS2Q9Y248 185 aa20.07■□□□□ 0.8
CCDC40-213ENST00000574933 NOC2LQ9Y3T9 749 aaKnown RBP20.07■□□□□ 0.8
CCDC40-213ENST00000574933 H0YCG3 227 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 TRAK2O60296 914 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 GHRP10912 638 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 IDEP14735 1019 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 CSF2RAP15509 400 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 PTMSP20962 102 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 FPGSQ05932 587 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 MBTD1Q05BQ5 628 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 FAM228AQ86W67 206 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 SFR1Q86XK3 245 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 ZBTB8OSQ8IWT0 167 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 RPUSD2Q8IZ73 545 aaKnown RBP20.06■□□□□ 0.8
CCDC40-213ENST00000574933 TMEM161BQ8NDZ6 487 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 DEPTORQ8TB45 409 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 SCLT1Q96NL6 688 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 CCDC113Q9H0I3 377 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 FZD8Q9H461 694 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 ERVK-5Q9HDB9 667 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 IL23AQ9NPF7 189 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 KMT5AQ9NQR1 393 aa20.06■□□□□ 0.8
CCDC40-213ENST00000574933 CCDC169A6NNP5 214 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 GPR182O15218 404 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 RPS6KA5O75582 802 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 SFPQP23246 707 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCDC40-213ENST00000574933 ABCD1P33897 745 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 HERC4Q5GLZ8 1057 aaPredicted RBP20.05■□□□□ 0.8
CCDC40-213ENST00000574933 FAM178BQ8IXR5 827 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 APBB2Q92870 758 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 PRIMPOLQ96LW4 560 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 STRA6Q9BX79 667 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 PADI3Q9ULW8 664 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 PTPRSQ13332 1948 aa20.05■□□□□ 0.8
CCDC40-213ENST00000574933 SLC16A4O15374 487 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 PPP1R37O75864 691 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 GTF2BQ00403 316 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 PNOCQ13519 176 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 KCNB1Q14721 858 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 AMHR2Q16671 573 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 ZNF720Q7Z2F6 126 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 HAUS6Q7Z4H7 955 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 LBHD1Q9BQE6 289 aaPredicted RBP20.04■□□□□ 0.8
CCDC40-213ENST00000574933 IFIH1Q9BYX4 1025 aaKnown RBP20.04■□□□□ 0.8
CCDC40-213ENST00000574933 CLSTN2Q9H4D0 955 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 ZHX3Q9H4I2 956 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 PRMT7Q9NVM4 692 aaPredicted RBP20.04■□□□□ 0.8
CCDC40-213ENST00000574933 ST3GAL5Q9UNP4 418 aa20.04■□□□□ 0.8
CCDC40-213ENST00000574933 TRIP11Q15643 1979 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.03■□□□□ 0.8
CCDC40-213ENST00000574933 RHOBTB3O94955 611 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 RPN1P04843 607 aaKnown RBP20.03■□□□□ 0.8
CCDC40-213ENST00000574933 CD52P31358 61 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 SARSP49591 514 aaKnown RBP20.03■□□□□ 0.8
CCDC40-213ENST00000574933 PAK2Q13177 524 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 PSMD2Q13200 908 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 ALCAMQ13740 583 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 MAPK6Q16659 721 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 KMT5BQ4FZB7 885 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 NT5DC1Q5TFE4 455 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 CNKSR3Q6P9H4 555 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 C16orf59Q7L2K0 433 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 TAS1R3Q7RTX0 852 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 DBF4BQ8NFT6 615 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 SEPT8Q92599 483 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 HVCN1Q96D96 273 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 GSDMAQ96QA5 445 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 KIFC3Q9BVG8 833 aa20.03■□□□□ 0.8
CCDC40-213ENST00000574933 CITO14578 2027 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 H0YGN5 161 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 INO80B-WBP1J3KQ70 363 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 K7ERI5 159 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 ACKR2O00590 384 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 CSDE1O75534 798 aaKnown RBP20.02■□□□□ 0.8
CCDC40-213ENST00000574933 SMC2O95347 1197 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 NMT1P30419 496 aaKnown RBP20.02■□□□□ 0.8
CCDC40-213ENST00000574933 AXLP30530 894 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 MAGEA10P43363 369 aaPredicted RBP20.02■□□□□ 0.8
CCDC40-213ENST00000574933 DSC3Q14574 896 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 FAM26FQ5R3K3 315 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 CATSPER4Q7RTX7 472 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 DEFB128Q7Z7B8 93 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 GDF15Q99988 308 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 FTHL17Q9BXU8 183 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 CHST12Q9NRB3 414 aa20.02■□□□□ 0.8
CCDC40-213ENST00000574933 PCDHA5Q9Y5H7 936 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms