RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 UIMC1Q96RL1 719 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 CAMKK2Q96RR4 588 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 TGS1Q96RS0 853 aaKnown RBP10.31□□□□□ -0.76
CCDC40-212ENST00000574799 TMEM60Q9H2L4 133 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 VCX3BQ9H321 246 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 VCX3AQ9NNX9 186 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 INTUQ9ULD6 942 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 SLC12A4Q9UP95 1085 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 PJA2O43164 708 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 SNX3O60493 162 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 CLSTN1O94985 981 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 APBA3O96018 575 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 USP11P51784 963 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 DYNC1I2Q13409 638 aaKnown RBP10.31□□□□□ -0.76
CCDC40-212ENST00000574799 PITPNM3Q9BZ71 974 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 ADAM22Q9P0K1 906 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 PCDHGC5Q9Y5F6 944 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 AGTP01019 485 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 NPR1P16066 1061 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 CNGA1P29973 690 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 RRP1BQ14684 758 aaKnown RBP10.31□□□□□ -0.76
CCDC40-212ENST00000574799 EMC10Q5UCC4 262 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 HHATQ5VTY9 493 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 CDC42EP5Q6NZY7 148 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 MYOCDQ8IZQ8 938 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 ERP27Q96DN0 273 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 COA1Q9GZY4 146 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 CUEDC2Q9H467 287 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 STX8Q9UNK0 236 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 COL4A3BPQ9Y5P4 624 aa10.31□□□□□ -0.76
CCDC40-212ENST00000574799 TMEM120BA0PK00 339 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 YDJCA8MPS7 323 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 OR52Z1P0C646 297 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 AKR1B1P15121 316 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 RNF220Q5VTB9 566 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 USP17L2Q6R6M4 530 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 VPS52Q8N1B4 723 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 DAGLBQ8NCG7 672 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 PABPC3Q9H361 631 aaKnown RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 BARHL2Q9NY43 387 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 CTTNBP2NLQ9P2B4 639 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 PAEPP09466 180 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 RARAP10276 462 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 KCNA3P22001 575 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 FKBP3Q00688 224 aaKnown RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 RNASELQ05823 741 aaKnown RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 LONRF1Q17RB8 773 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 KRT79Q5XKE5 535 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 APBB1IPQ7Z5R6 666 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 TRIM74Q86UV6 250 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 TRIM73Q86UV7 250 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 PIGOQ8TEQ8 1089 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 STOML1Q9UBI4 398 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 ASIC3Q9UHC3 531 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 USP17L5A8MUK1 530 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 NVLO15381 856 aaKnown RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 CHRNA5P30532 468 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 ERFP50548 548 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 GSTO1P78417 241 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 DACT2Q5SW24 774 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 FBXO25Q8TCJ0 367 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 DTX3LQ8TDB6 740 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 TMEM237Q96Q45 408 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 EYA3Q99504 573 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 SUDS3Q9H7L9 328 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-212ENST00000574799 PIDD1Q9HB75 910 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 FAM198AQ9UFP1 575 aa10.3□□□□□ -0.76
CCDC40-212ENST00000574799 BRAFP15056 766 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 VPS41P49754 854 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SCNN1DP51172 638 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 ZFYVE27Q5T4F4 411 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SCYL3Q8IZE3 742 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SNX29Q8TEQ0 813 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 MAIP1Q8WWC4 291 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 LRRC37BQ96QE4 947 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 H0YGN5 161 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 LIN7AO14910 233 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-212ENST00000574799 NKRFO15226 690 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC40-212ENST00000574799 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 DYDC2Q96IM9 177 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 EPAS1Q99814 870 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 GORASP1Q9BQQ3 440 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 MOV10L1Q9BXT6 1211 aaKnown RBP10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SEMA4AQ9H3S1 761 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 RIOX1Q9H6W3 641 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SH3GLB2Q9NR46 395 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 ARMCX3Q9UH62 379 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-212ENST00000574799 HAO1Q9UJM8 370 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 NFS1Q9Y697 457 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 HERC4Q5GLZ8 1057 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms