RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PCDHAC2Q9Y5I4 1007 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 VCAM1P19320 739 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 ODR4Q5SWX8 454 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 RHOT2Q8IXI1 618 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 GMCL1P1Q8NEA9 526 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 CENPTQ96BT3 561 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 C18orf8Q96DM3 657 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 AGPAT1Q99943 283 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 CCDC169A6NNP5 214 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 CHUKO15111 745 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 EXOC3O60645 756 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 BMP3P12645 472 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 DRG2P55039 364 aaKnown RBP16.9■□□□□ 0.3
NUP88-207ENST00000573584 KIF22Q14807 665 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 WDR18Q9BV38 432 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 GEMIN8Q9NWZ8 242 aaKnown RBP16.9■□□□□ 0.3
NUP88-207ENST00000573584 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 SEL1LQ9UBV2 794 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
NUP88-207ENST00000573584 ATP2C2O75185 946 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 ZDHHC24Q6UX98 284 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 RNF25Q96BH1 459 aaPredicted RBP16.9■□□□□ 0.3
NUP88-207ENST00000573584 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 PGM2Q96G03 612 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 ZDHHC15Q96MV8 337 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
NUP88-207ENST00000573584 UBAP1LF5GYI3 381 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.29
NUP88-207ENST00000573584 CHN1P15882 459 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
NUP88-207ENST00000573584 BFSP1Q12934 665 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SLC29A2Q14542 456 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 ABCB5Q2M3G0 1257 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SYCP3Q8IZU3 236 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 UBL4BQ8N7F7 174 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SLC20A1Q8WUM9 679 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SELENOSQ9BQE4 189 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 A1CFQ9NQ94 594 aaKnown RBP16.89■□□□□ 0.29
NUP88-207ENST00000573584 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SMIM23A6NLE4 172 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 PIK3CDO00329 1044 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 PSMD10O75832 226 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 BCRP11274 1271 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 SCTRP47872 440 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 ZNF131P52739 623 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 KIAA0825Q8IV33 1275 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 KRT35Q92764 455 aa16.89■□□□□ 0.29
NUP88-207ENST00000573584 MYCBPQ99417 103 aaPredicted RBP16.89■□□□□ 0.29
NUP88-207ENST00000573584 UBE2TQ9NPD8 197 aaPredicted RBP16.89■□□□□ 0.29
NUP88-207ENST00000573584 UBE4BO95155 1302 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 TMEM110-MUSTN1A8MSY1 372 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 PHF2O75151 1096 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 CHRNA3P32297 505 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 RDXP35241 583 aaKnown RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 GSCP56915 257 aaPredicted RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.88■□□□□ 0.29
NUP88-207ENST00000573584 MIF4GDA9UHW6 222 aaKnown RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 RGS16O15492 202 aaPredicted RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 CFBP00751 764 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 MMEP08473 750 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 PTGIRP43119 386 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 PPP2R5CQ13362 524 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 LACTB2Q53H82 288 aaPredicted RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 PRELID2Q8N945 189 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 LMO3Q8TAP4 145 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 CCT6BQ92526 530 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 P3H4Q92791 437 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 ZKSCAN4Q969J2 545 aaPredicted RBP16.88■□□□□ 0.29
NUP88-207ENST00000573584 NACC1Q96RE7 527 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 HAUS2Q9NVX0 235 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 GRHL1Q9NZI5 618 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
NUP88-207ENST00000573584 GAS7O60861 476 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 HSPA6P17066 643 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 MAP2K2P36507 400 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 MMP13P45452 471 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 MARCKSL1P49006 195 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 PRELPP51888 382 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 HADHBP55084 474 aaKnown RBP16.87■□□□□ 0.29
NUP88-207ENST00000573584 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 CYB5D1Q6P9G0 228 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 GPATCH11Q8N954 259 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 ZNF317Q96PQ6 595 aaPredicted RBP16.87■□□□□ 0.29
NUP88-207ENST00000573584 SEMA4AQ9H3S1 761 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 AZI2Q9H6S1 392 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 PRR12Q9ULL5 1215 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 PODXLO00592 558 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 RFX1P22670 979 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 RPL21P46778 160 aaKnown RBP16.87■□□□□ 0.29
NUP88-207ENST00000573584 IFI35P80217 286 aaPredicted RBP16.87■□□□□ 0.29
NUP88-207ENST00000573584 C11orf63Q6NUN7 778 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms