RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 HOXA2O43364 376 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 DNAJB1P25685 340 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 PTENP60484 403 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
LITAF-208ENST00000571627 CAMK1Q14012 370 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 TFDP1Q14186 410 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 PDIA5Q14554 519 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 TCEAL5Q5H9L2 206 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 TJAP1Q5JTD0 557 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 PADI6Q6TGC4 694 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 DTHD1Q6ZMT9 781 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 BRAPQ7Z569 592 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 ABI1Q8IZP0 508 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 COLGALT1Q8NBJ5 622 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 P2RX5Q93086 422 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 HLA-CQ95604 372 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 ASB2Q96Q27 587 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 CWH43Q9H720 699 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 FAM105AQ9NUU6 356 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 DDX19AQ9NUU7 478 aaKnown RBP16.16■□□□□ 0.18
LITAF-208ENST00000571627 KIAA1024Q9UPX6 916 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 INO80B-WBP1J3KQ70 363 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 HOXA11P31270 313 aaPredicted RBP16.15■□□□□ 0.18
LITAF-208ENST00000571627 PBX3P40426 434 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 PRPHP41219 470 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 KCNQ1P51787 676 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 ATP2C1P98194 919 aaPredicted RBP16.15■□□□□ 0.18
LITAF-208ENST00000571627 SPPL3Q8TCT6 385 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 TRAIPQ9BWF2 469 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 RAB34Q9BZG1 259 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 LMAN2LQ9H0V9 348 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 BHMT2Q9H2M3 363 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 NSUN3Q9H649 340 aaKnown RBP16.15■□□□□ 0.18
LITAF-208ENST00000571627 POLD4Q9HCU8 107 aa16.15■□□□□ 0.18
LITAF-208ENST00000571627 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 LRRIQ4A6NIV6 560 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 TSPAN1O60635 241 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 ERLIN2O94905 339 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 EOMESO95936 686 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 HSP90AA1P07900 732 aaKnown RBP16.14■□□□□ 0.17
LITAF-208ENST00000571627 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
LITAF-208ENST00000571627 SYT1P21579 422 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 MUTP22033 750 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 MBTD1Q05BQ5 628 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 UBXN11Q5T124 520 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 LRRC43Q8N309 656 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 BSNDQ8WZ55 320 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 CPB2Q96IY4 423 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
LITAF-208ENST00000571627 AAASQ9NRG9 546 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 COG5Q9UP83 839 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 PCDHB2Q9Y5E7 798 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 PCDHB12Q9Y5F1 795 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
LITAF-208ENST00000571627 E9PMD0 336 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 B4GALT5O43286 388 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 FGF18O76093 207 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 LAG3P18627 525 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 CYP11B2P19099 503 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 IRS1P35568 1242 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 RAB27AP51159 221 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
LITAF-208ENST00000571627 AMHR2Q16671 573 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 NAALADL2Q58DX5 795 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 IFNLR1Q8IU57 520 aaPredicted RBP16.13■□□□□ 0.17
LITAF-208ENST00000571627 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 POF1BQ8WVV4 589 aa16.13■□□□□ 0.17
LITAF-208ENST00000571627 UBE2ZQ9H832 354 aaPredicted RBP16.13■□□□□ 0.17
LITAF-208ENST00000571627 BDP1A6H8Y1 2624 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 NCOR1O75376 2440 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 BMP15O95972 392 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 SKIP12755 728 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
LITAF-208ENST00000571627 POU5F1BQ06416 359 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 HYAL1Q12794 435 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 KCNT2Q6UVM3 1135 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 EP400NLQ6ZTU2 488 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 CDR2LQ86X02 465 aaPredicted RBP16.12■□□□□ 0.17
LITAF-208ENST00000571627 EIF2AQ9BY44 585 aaKnown RBP16.12■□□□□ 0.17
LITAF-208ENST00000571627 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 MYH11P35749 1972 aa16.12■□□□□ 0.17
LITAF-208ENST00000571627 TDRD15B5MCY1 1934 aaKnown RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 STX6O43752 255 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 ZNF623O75123 536 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 BMP1P13497 986 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 ARF4P18085 180 aaPredicted RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 KCNA5P22460 613 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 AAK1Q2M2I8 961 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 CDCA2Q69YH5 1023 aaPredicted RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 NOTUMQ6P988 496 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 GLB1LQ6UWU2 654 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 AGMOQ6ZNB7 445 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms