RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 TYW1BQ6NUM6 668 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 BCL7CQ8WUZ0 217 aaPredicted RBP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 ZNF668Q96K58 619 aaPredicted RBP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 CNTNAP3Q9BZ76 1288 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 GBP3Q9H0R5 595 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 BARHL2Q9NY43 387 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 SSX2IPQ9Y2D8 614 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 RBM8AQ9Y5S9 174 aaKnown RBP12.8□□□□□ -0.36
CHMP6-202ENST00000571457 C2orf16Q68DN1 1984 aa12.8□□□□□ -0.36
CHMP6-202ENST00000571457 FANCMQ8IYD8 2048 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 CCDC195A0A1B0GUA6 201 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 SGSM2O43147 1006 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
CHMP6-202ENST00000571457 ZNF623O75123 536 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 KRT37O76014 449 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 IGHDP01880 384 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 ALDH2P05091 517 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 ADH1AP07327 375 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 DCNP07585 359 aaKnown RBP12.79□□□□□ -0.36
CHMP6-202ENST00000571457 FGFR4P22455 802 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 SLC11A1P49279 550 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 CLK2P49760 499 aaKnown RBP12.79□□□□□ -0.36
CHMP6-202ENST00000571457 DNM2P50570 870 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 RSPO4Q2I0M5 234 aaPredicted RBP12.79□□□□□ -0.36
CHMP6-202ENST00000571457 TTC22Q5TAA0 569 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 FEZF2Q8TBJ5 459 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 URGCPQ8TCY9 931 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 RSAD2Q8WXG1 361 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 PGBD4Q96DM1 585 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 SHDQ96IW2 340 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 ARHGEF3Q9NR81 526 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHMP6-202ENST00000571457 PIN4Q9Y237 131 aaKnown RBP12.79□□□□□ -0.36
CHMP6-202ENST00000571457 CLUHO75153 1309 aa12.79□□□□□ -0.36
CHMP6-202ENST00000571457 LILRB3O75022 631 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 N4BP1O75113 896 aaKnown RBP12.78□□□□□ -0.36
CHMP6-202ENST00000571457 OFD1O75665 1012 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 GLUD1P00367 558 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 SSBP05455 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP6-202ENST00000571457 URODP06132 367 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
CHMP6-202ENST00000571457 LONRF3Q496Y0 759 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 JAKMIP3Q5VZ66 844 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 SUMF1Q8NBK3 374 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 GPR152Q8TDT2 470 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 LPPQ93052 612 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 FAM193BQ96PV7 902 aaPredicted RBP12.78□□□□□ -0.36
CHMP6-202ENST00000571457 TMEM175Q9BSA9 504 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 FAM105AQ9NUU6 356 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
CHMP6-202ENST00000571457 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
CHMP6-202ENST00000571457 SPTLC1O15269 473 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 ZNF862O60290 1169 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 CSDE1O75534 798 aaKnown RBP12.77□□□□□ -0.37
CHMP6-202ENST00000571457 SOD2P04179 222 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 AK2P54819 239 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 PRKCEQ02156 737 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 ZNF528Q3MIS6 628 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 PRR16Q569H4 304 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 ZNF410Q86VK4 478 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 SMG7Q92540 1137 aaKnown RBP12.77□□□□□ -0.37
CHMP6-202ENST00000571457 SECISBP2LQ93073 1101 aaKnown RBP12.77□□□□□ -0.37
CHMP6-202ENST00000571457 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 DISC1Q9NRI5 854 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 NCDNQ9UBB6 729 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 DOCK8Q8NF50 2099 aa12.77□□□□□ -0.37
CHMP6-202ENST00000571457 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 ATRXP46100 2492 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 PRR5-ARHGAP8B1AHC4 643 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 C2CD2LO14523 706 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 INPPL1O15357 1258 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 C1RP00736 705 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 LAMP2P13473 410 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 SFNP31947 248 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 JAK3P52333 1124 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 ARHGAP8P85298 464 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 RTN1Q16799 776 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
CHMP6-202ENST00000571457 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms