RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MCPH1Q8NEM0 835 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 PHOSPHO2Q8TCD6 241 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 LARP4BQ92615 738 aaKnown RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 TIFAQ96CG3 184 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 ZNF689Q96CS4 500 aaPredicted RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 CALML4Q96GE6 196 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CDK5RAP3Q96JB5 506 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 FIZ1Q96SL8 496 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 REEP2Q9BRK0 252 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CCDC113Q9H0I3 377 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 NT5C3AQ9H0P0 336 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 MTIF3Q9H2K0 278 aaKnown RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 GOLPH3LQ9H4A5 285 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CERS4Q9HA82 394 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 RGS18Q9NS28 235 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CHD7Q9P2D1 2997 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 STK24Q9Y6E0 443 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 TTC28Q96AY4 2481 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CHD9Q3L8U1 2897 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 LRRIQ4A6NIV6 560 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 INO80B-WBP1J3KQ70 363 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 RFXAPO00287 272 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 ASAP2O43150 1006 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 SLC26A4O43511 780 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 TLL1O43897 1013 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 DGKIO75912 1065 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 AMHP03971 560 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 FGFR1P11362 822 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 ARF4P18085 180 aaPredicted RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 NPTX2P47972 431 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 ME1P48163 572 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 SARSP49591 514 aaKnown RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 AFF1P51825 1210 aaKnown RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 PEX3P56589 373 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 KRT85P78386 507 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 FAM189BP81408 668 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 TAP1Q03518 808 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 POU5F1BQ06416 359 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 MXD4Q14582 209 aaPredicted RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 GRIN2CQ14957 1233 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 LONRF3Q496Y0 759 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 CLLU1OSQ5K130 101 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 RRAGBQ5VZM2 374 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 EEF1DP3Q658K8 133 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 ATL3Q6DD88 541 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 DYMQ7RTS9 669 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 CATSPER4Q7RTX7 472 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 ECHDC2Q86YB7 292 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 EXOC8Q8IYI6 725 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 SP7Q8TDD2 431 aaPredicted RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 KCNG4Q8TDN1 519 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 LPPQ93052 612 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 DNAJC19Q96DA6 116 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 SPATA32Q96LK8 384 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 GUCD1Q96NT3 240 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 FTHL17Q9BXU8 183 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 EIF2AQ9BY44 585 aaKnown RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 NFKBIZQ9BYH8 718 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 FGFBP2Q9BYJ0 223 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 INO80BQ9C086 356 aaPredicted RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 CXCL16Q9H2A7 254 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 RNF39Q9H2S5 420 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 IKZF4Q9H2S9 585 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 FZD8Q9H461 694 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 AGPAT5Q9NUQ2 364 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 PIN4Q9Y237 131 aaKnown RBP7.73□□□□□ -1.17
SMG6-209ENST00000571442 PCDHA11Q9Y5I1 949 aa7.73□□□□□ -1.17
SMG6-209ENST00000571442 TRIP11Q15643 1979 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 A0A1B0GVL5 298 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 DENND3A2RUS2 1198 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 LINC01553A4QN01 128 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 ABLIM1O14639 778 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 SLC16A4O15374 487 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 POLR2DO15514 142 aaKnown RBP7.72□□□□□ -1.17
SMG6-209ENST00000571442 B4GALT3O60512 393 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 EFCAB14O75071 495 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 PFKFB1P16118 471 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 LIG1P18858 919 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 SFPQP23246 707 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG6-209ENST00000571442 ANP32AP39687 249 aaKnown RBP7.72□□□□□ -1.17
SMG6-209ENST00000571442 STAT6P42226 847 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 NAMPTP43490 491 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 PHKA2P46019 1235 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 ZNF131P52739 623 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 NUCB2P80303 420 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 CDC42EP1Q00587 391 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 ADGRE1Q14246 886 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 PAN2Q504Q3 1202 aaKnown RBP7.72□□□□□ -1.17
SMG6-209ENST00000571442 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 LRRC55Q6ZSA7 311 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 SLC24A5Q71RS6 500 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 NPAS4Q8IUM7 802 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG6-209ENST00000571442 GRAMD1CQ8IYS0 662 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 SMG8Q8ND04 991 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms