RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 DNAJB1P25685 340 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 NPEPPSP55786 919 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 FOXK1P85037 733 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 UBE3AQ05086 875 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 ST3GAL1Q11201 340 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 CAMK1Q14012 370 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 CCDC83Q8IWF9 413 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 PSPC1Q8WXF1 523 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 DYDC2Q96IM9 177 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 CCDC43Q96MW1 224 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 RGL1Q9NZL6 768 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 PCDHA12Q9UN75 941 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 PIN4Q9Y237 131 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 NLRC5Q86WI3 1866 aa13.82□□□□□ -0.2
CTDNEP1-205ENST00000570828 A0A0U1RQF3 1178 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 GRXCR2A6NFK2 248 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 GAS2O43903 313 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 FGF18O76093 207 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 IL9P15248 144 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 IRS1P35568 1242 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 GUCY1B3Q02153 619 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 CTTNQ14247 550 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 EMC2Q15006 297 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 TWF2Q6IBS0 349 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 TPH2Q8IWU9 490 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 PLPP6Q8IY26 295 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 C8orf76Q96K31 380 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 CASD1Q96PB1 797 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 LLPHQ9BRT6 129 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-205ENST00000570828 EOMESO95936 686 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 PPM1AP35813 382 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 NDUFV1P49821 464 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 CLLU1OSQ5K130 101 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 MICAL1Q8TDZ2 1067 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 TMEM143Q96AN5 459 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 ZNF558Q96NG5 402 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 EIF2AK1Q9BQI3 630 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 CWH43Q9H720 699 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 TLR9Q9NR96 1032 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 SH2B1Q9NRF2 756 aaPredicted RBP13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 RNF19AQ9NV58 838 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 EVPLQ92817 2033 aa13.8□□□□□ -0.2
CTDNEP1-205ENST00000570828 TBX10O75333 385 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 SKIP12755 728 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 ATF7P17544 494 aaPredicted RBP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 SSTR3P32745 418 aaPredicted RBP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 MCM7P33993 719 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 LTBRP36941 435 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 TXKP42681 527 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 PHKA2P46019 1235 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 NRIP1P48552 1158 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 RAB27AP51159 221 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 CLUL1Q15846 466 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 ADGRD2Q7Z7M1 963 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 HELQQ8TDG4 1101 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 PRPF31Q8WWY3 499 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 RSPH1Q8WYR4 309 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 KCNK17Q96T54 332 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 MTRQ99707 1265 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 TRAIPQ9BWF2 469 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 IFT122Q9HBG6 1241 aa13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 PUF60Q9UHX1 559 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-205ENST00000570828 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 TCF20Q9UGU0 1960 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 MYO7AQ13402 2215 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 WNT7AO00755 349 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 LINC01565O15544 149 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 SLITRK3O94933 977 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 LYPLA2O95372 231 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 PBX3P40426 434 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 LAMTOR4Q0VGL1 99 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms