RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SRGAP2CP0DJJ0 459 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 EPCAMP16422 314 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 AFF1P51825 1210 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 VCPP55072 806 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 RNASELQ05823 741 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 SCRN1Q12765 414 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CES5AQ6NT32 575 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CPLX2Q6PUV4 134 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 GLB1LQ6UWU2 654 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 KRT25Q7Z3Z0 450 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 DAGLBQ8NCG7 672 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CASP10Q92851 521 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 MBOAT7Q96N66 472 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 MRPL9Q9BYD2 267 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 POMKQ9H5K3 350 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 NRDE2Q9H7Z3 1164 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 CHST12Q9NRB3 414 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 FAM105AQ9NUU6 356 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 TBC1D13Q9NVG8 400 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 RGL1Q9NZL6 768 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 DNAJB4Q9UDY4 337 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 VAV3Q9UKW4 847 aa9.65□□□□□ -0.86
CTDNEP1-203ENST00000570385 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 C2CD4DB7Z1M9 353 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 OFD1O75665 1012 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 ASGR2P07307 311 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 GALTP07902 379 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 MYBP10242 640 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 HOXB8P17481 243 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 QARSP47897 775 aaKnown RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 SLC11A1P49279 550 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 POLGP54098 1239 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 CDC42EP1Q00587 391 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 CYP4A11Q02928 519 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 SIGLEC14Q08ET2 396 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 CTTNQ14247 550 aaKnown RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 PTPN21Q16825 1174 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 EARS2Q5JPH6 523 aaKnown RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 NCAPH2Q6IBW4 605 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 GALNT17Q6IS24 598 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 MOXD1Q6UVY6 613 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 BMP8AQ7Z5Y6 402 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 NEK8Q86SG6 692 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZNF410Q86VK4 478 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZNF280BQ86YH2 543 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 FBXL6Q8N531 539 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 KREMEN2Q8NCW0 462 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 ASIC4Q96FT7 647 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 IGSF21Q96ID5 467 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 CEP170P1Q96L14 293 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 VN1R3Q9BXE9 311 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 INO80BQ9C086 356 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZBP1Q9H171 429 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 KCNH6Q9H252 994 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 ADAM7Q9H2U9 754 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 IFT122Q9HBG6 1241 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 FAM86C1Q9NVL1 165 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 PCDHB2Q9Y5E7 798 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 COL4A3BPQ9Y5P4 624 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 WDFY4Q6ZS81 3184 aa9.64□□□□□ -0.87
CTDNEP1-203ENST00000570385 A0A087WWV3 80 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 DDHD2O94830 711 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 POMCP01189 267 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 FOSBP53539 338 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 LAMTOR4Q0VGL1 99 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 TCF15Q12870 199 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 PPP2R5CQ13362 524 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 BMS1Q14692 1282 aaKnown RBP9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 XKR9Q5GH70 373 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 TMC5Q6UXY8 1006 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 AGMOQ6ZNB7 445 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 NECAB1Q8N987 351 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 RNF149Q8NC42 400 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 SLC7A3Q8WY07 619 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 HAS1Q92839 578 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 DYDC2Q96IM9 177 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 LXNQ9BS40 222 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 PHF20Q9BVI0 1012 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 TM6SF1Q9BZW5 370 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 KCNMB3Q9NPA1 279 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 AGPAT5Q9NUQ2 364 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 TPCN1Q9ULQ1 816 aa9.63□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZFHX2Q9C0A1 2572 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 C2CD2LO14523 706 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZNF623O75123 536 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 CTDNEP1O95476 244 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 BRD1O95696 1058 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 P4HBP07237 508 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 CTSAP10619 480 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms