RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GPC5P78333 572 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 NOMO2Q5JPE7 1267 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 PPM1JQ5JR12 505 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZNF280BQ86YH2 543 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 NELL1Q92832 810 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZNF707Q96C28 371 aaPredicted RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 SHDQ96IW2 340 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 BCO2Q9BYV7 579 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 GBP3Q9H0R5 595 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 MRPL17Q9NRX2 175 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZSCAN32Q9NX65 697 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 INPP5FQ9Y2H2 1132 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 NUMBLQ9Y6R0 609 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 TDRD15B5MCY1 1934 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 CNOT1A5YKK6 2376 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 C2CD2LO14523 706 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 DDAH1O94760 285 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 DDHD2O94830 711 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 PAPLNO95428 1278 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 GNAQP50148 359 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 SNW1Q13573 536 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 GLB1LQ6UWU2 654 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 RALYLQ86SE5 291 aaKnown RBP11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 NCOA7Q8NI08 942 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 RSPH1Q8WYR4 309 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 TRAIPQ9BWF2 469 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 CEP131Q9UPN4 1083 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 ASPMQ8IZT6 3477 aa11.83□□□□□ -0.52
CTDNEP1-202ENST00000570380 E7EWF7 191 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 SLC30A4O14863 429 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 TEX28O15482 410 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 TBC1D4O60343 1298 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 GLUD1P00367 558 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 SPATA31D3P0C874 917 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 TMOD1P28289 359 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 AK2P54819 239 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 SPATA31D4Q6ZUB0 917 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 GET4Q7L5D6 327 aaPredicted RBP11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 NIPA1Q7RTP0 329 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 TAS1R1Q7RTX1 841 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 HEATR3Q7Z4Q2 680 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 FGF14Q92915 247 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 RPS6KC1Q96S38 1066 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 ANO3Q9BYT9 981 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM105AQ9NUU6 356 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 GABBR1Q9UBS5 961 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
CTDNEP1-202ENST00000570380 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 FRYQ5TBA9 3013 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM170BA6NMN3 283 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 IPO5O00410 1097 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZNF623O75123 536 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 SOD2P04179 222 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 ALDH2P05091 517 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 URODP06132 367 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 ADH1AP07327 375 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 RXRAP19793 462 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZNF76P36508 570 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 AFF1P51825 1210 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 SPEM2Q0P670 501 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 UBXN2BQ14CS0 331 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 PARM1Q6UWI2 310 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 PLA2G4DQ86XP0 818 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 MB21D2Q8IYB1 491 aaPredicted RBP11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 CCDC82Q8N4S0 544 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 NLRP7Q8WX94 980 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 SCLT1Q96NL6 688 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 OSBPL6Q9BZF3 934 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 NT5C3AQ9H0P0 336 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 PIDD1Q9HB75 910 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 DPP7Q9UHL4 492 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAN1Q9Y2M0 1017 aa11.81□□□□□ -0.52
CTDNEP1-202ENST00000570380 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 NRP1O14786 923 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 FOSP01100 380 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 SKIP12755 728 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 CD72P21854 359 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 SREBF1P36956 1147 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 PTH1RQ03431 593 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms