RNA–Protein interactions for RNA: ENST00000570117.5

TAF1C-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

APPRIS ALT2 TSL 2 BASIC

Gene TAF1C, Length 2,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-222	ENST00000570117	KCTD19	Q17RG1	926 aa	Predicted RBP	19.02	■□□□□ 0.64
TAF1C-222	ENST00000570117	C1orf220	Q5T0J3	134 aa		19.02	■□□□□ 0.64
TAF1C-222	ENST00000570117	NIPA1	Q7RTP0	329 aa		19.02	■□□□□ 0.64
TAF1C-222	ENST00000570117	PRPF38A	Q8NAV1	312 aa	Known RBP	19.02	■□□□□ 0.64
TAF1C-222	ENST00000570117	LMBR1	Q8WVP7	490 aa		19.02	■□□□□ 0.64
TAF1C-222	ENST00000570117	CALR3	Q96L12	384 aa	Known RBP	19.02	■□□□□ 0.64
TAF1C-222	ENST00000570117	TMEM150B	A6NC51	233 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	PGRMC1	O00264	195 aa	Known RBP	19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	OPA1	O60313	960 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	TMEM253	P0C7T8	217 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	ITGA4	P13612	1032 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	PPP3CA	Q08209	521 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	PPFIA1	Q13136	1202 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	ARHGAP44	Q17R89	818 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	ARHGEF26	Q96DR7	871 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	CBWD1	Q9BRT8	395 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	DBR1	Q9UK59	544 aa	Known RBP	19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	FAM170A	A1A519	330 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	SART1	O43290	800 aa	Known RBP	19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	KRT14	P02533	472 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	KIF22	Q14807	665 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	PCNX4	Q63HM2	1172 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	CPXCR1	Q8N123	301 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	PLEKHO2	Q8TD55	490 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	SYTL5	Q8TDW5	730 aa	Predicted RBP	19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	TMEM174	Q8WUU8	243 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	RFFL	Q8WZ73	363 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	ISCU	Q9H1K1	167 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	CWC15	Q9P013	229 aa	Known RBP	19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	PPP1R9A	Q9ULJ8	1098 aa		19.01	■□□□□ 0.63
TAF1C-222	ENST00000570117	CLSTN1	O94985	981 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	MAPT	P10636	758 aa	Known RBP	19	■□□□□ 0.63
TAF1C-222	ENST00000570117	UGCG	Q16739	394 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	SYCE1	Q8N0S2	351 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	FHDC1	Q9C0D6	1143 aa	Predicted RBP	19	■□□□□ 0.63
TAF1C-222	ENST00000570117	TAF1D	Q9H5J8	278 aa	Predicted RBP	19	■□□□□ 0.63
TAF1C-222	ENST00000570117	RAVER2	Q9HCJ3	691 aa	Known RBP	19	■□□□□ 0.63
TAF1C-222	ENST00000570117	LARS	Q9P2J5	1176 aa	Known RBP	19	■□□□□ 0.63
TAF1C-222	ENST00000570117	EMSY	Q7Z589	1322 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	LOXHD1	Q8IVV2	1947 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	ALAS1	P13196	640 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	PLS3	P13797	630 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	ABCB4	P21439	1286 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	ARHGEF19	Q8IW93	802 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	WHAMM	Q8TF30	809 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	TAAR1	Q96RJ0	339 aa		19	■□□□□ 0.63
TAF1C-222	ENST00000570117	DDX47	Q9H0S4	455 aa	Known RBP	19	■□□□□ 0.63
TAF1C-222	ENST00000570117	DDX3Y	O15523	660 aa	Known RBP	18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	LYPLA2	O95372	231 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	QARS	P47897	775 aa	Known RBP	18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	IRAK1	P51617	712 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	DCAF12L1	Q5VU92	463 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	C12orf56	Q8IXR9	622 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	THAP2	Q9H0W7	228 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	TMEM206	Q9H813	350 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	SLC38A10	Q9HBR0	1119 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	HOMER2	Q9NSB8	354 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	SRCAP	Q6ZRS2	3230 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	WDR46	O15213	610 aa	Known RBP	18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	ATP9A	O75110	1047 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	VAMP7	P51809	220 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	MTMR1	Q13613	665 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	CFAP58	Q5T655	872 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	INTS8	Q75QN2	995 aa	Known RBP	18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	MCF2L2	Q86YR7	1114 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	EIF1AD	Q8N9N8	165 aa	Known RBP	18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	SLC20A1	Q8WUM9	679 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	NEUROG2	Q9H2A3	272 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	GPRC5C	Q9NQ84	441 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	COG5	Q9UP83	839 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	SAMM50	Q9Y512	469 aa		18.99	■□□□□ 0.63
TAF1C-222	ENST00000570117	KRIT1	O00522	736 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	TNFAIP3	P21580	790 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	HSPA9	P38646	679 aa	Known RBP	18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	GTF2B	Q00403	316 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	EPC2	Q52LR7	807 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	CD302	Q8IX05	232 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	SH2D3C	Q8N5H7	860 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	ACCS	Q96QU6	501 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	RUFY1	Q96T51	708 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	AMFR	Q9UKV5	643 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	NR2E1	Q9Y466	385 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	GRIN2D	O15399	1336 aa		18.98	■□□□□ 0.63
TAF1C-222	ENST00000570117	BACH1	O14867	736 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	KRT13	P13646	458 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	EIF2AK2	P19525	551 aa	Known RBP	18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	YWHAB	P31946	246 aa	Known RBP	18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	GCLM	P48507	274 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	RPS6	P62753	249 aa	Known RBP	18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	HAUS6	Q7Z4H7	955 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	SRL	Q86TD4	932 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	KIAA1683	Q9H0B3	1180 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	HSPBP1	Q9NZL4	362 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	AMACR	Q9UHK6	382 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	DAAM1	Q9Y4D1	1078 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	PPFIA4	O75335	1185 aa		18.97	■□□□□ 0.63
TAF1C-222	ENST00000570117	POU5F1	Q01860	360 aa	Known RBP	18.97	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms