RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 MAP2K5Q13163 448 aa24.63■■□□□ 1.53
VCPKMT-205ENST00000569518 CCDC102AQ96A19 550 aa24.63■■□□□ 1.53
VCPKMT-205ENST00000569518 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 KIF3CO14782 793 aa24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 HOXC6P09630 235 aa24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 BRDTQ58F21 947 aaPredicted RBP24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 PDXDC1Q6P996 788 aa24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 USP6NLQ92738 828 aa24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 ZNHIT6Q9NWK9 470 aaKnown RBP24.62■■□□□ 1.53
VCPKMT-205ENST00000569518 GOLGA6L9A6NEM1 432 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 KIF2AO00139 706 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 PON1P27169 355 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 APBA1Q02410 837 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 ACVR2BQ13705 512 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 EXOC3L4Q17RC7 722 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 DUSP28Q4G0W2 176 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 INTS8Q75QN2 995 aaKnown RBP24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 ZSWIM2Q8NEG5 633 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 GPBP1L1Q9HC44 474 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 LRRC53A6NM62 1247 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 GAS2O43903 313 aaKnown RBP24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 LGALS2P05162 132 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 SMPD1P17405 629 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 FMO5P49326 533 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 SREBF2Q12772 1141 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 MKRN4PQ13434 485 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 DRP2Q13474 957 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 GBP6Q6ZN66 633 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 RRAGAQ7L523 313 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 AFG1LQ8WV93 481 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 HHIPL1Q96JK4 782 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 ERAP1Q9NZ08 941 aa24.61■■□□□ 1.53
VCPKMT-205ENST00000569518 HBP1O60381 514 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 HOXD8P13378 290 aaPredicted RBP24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 SLC9A1P19634 815 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 IRF5Q13568 498 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 CAPSQ13938 189 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 CACNA2D4Q7Z3S7 1137 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 EXOC8Q8IYI6 725 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 SMC1BQ8NDV3 1235 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 FBXL18Q96ME1 805 aa24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 R3HCC1Q9Y3T6 440 aaKnown RBP24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 EPN1Q9Y6I3 576 aaPredicted RBP24.6■■□□□ 1.53
VCPKMT-205ENST00000569518 NDUFA10O95299 355 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 TRIM49P0CI25 452 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 TRIM49CP0CI26 452 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 POLR2FP61218 127 aaKnown RBP24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 IER5Q5VY09 327 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 RDH13Q8NBN7 331 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 SYN2Q92777 582 aaPredicted RBP24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 ZFYVE28Q9HCC9 887 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 SIX2Q9NPC8 291 aa24.59■■□□□ 1.53
VCPKMT-205ENST00000569518 LRRIQ4A6NIV6 560 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 HNRNPDLO14979 420 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 PIGRP01833 764 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 ADRB2P07550 413 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 ACTN1P12814 892 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 KRT13P13646 458 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 TM4SF4P48230 202 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 CRHR2Q13324 411 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 KLHDC7AQ5VTJ3 777 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 IQSEC1Q6DN90 963 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 TRIM65Q6PJ69 517 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 ACRBPQ8NEB7 543 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 DEPTORQ8TB45 409 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 NUCKS1Q9H1E3 243 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 RNPEPQ9H4A4 650 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 NLRC4Q9NPP4 1024 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 GCNT4Q9P109 453 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 FBXL5Q9UKA1 691 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 ABT1Q9ULW3 272 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 TRPC6Q9Y210 931 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 REXO2Q9Y3B8 237 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 ADCY6O43306 1168 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 TUBB4AP04350 444 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 GARTP22102 1010 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 CBWD6Q4V339 395 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 CBWD3Q5JTY5 395 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 CBWD5Q5RIA9 395 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 C1orf220Q5T0J3 134 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 CCDC170Q8IYT3 715 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 PLEKHO2Q8TD55 490 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 TCP11Q8WWU5 503 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 PRPF31Q8WWY3 499 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 NHEJ1Q9H9Q4 299 aaPredicted RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 FLRT1Q9NZU1 646 aa24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 ZHX1Q9UKY1 873 aaPredicted RBP24.58■■□□□ 1.53
VCPKMT-205ENST00000569518 VAMP7P51809 220 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 DLG4P78352 724 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 SNRNP35Q16560 246 aaKnown RBP24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 CBWD2Q8IUF1 395 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 ZIC5Q96T25 663 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 C16orf70Q9BSU1 422 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 TMEM134Q9H6X4 195 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 ARHGAP20Q9P2F6 1191 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 STYXL1Q9Y6J8 313 aa24.57■■□□□ 1.52
VCPKMT-205ENST00000569518 PHLPP2Q6ZVD8 1323 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 ADCY3O60266 1144 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 PPFIA4O75335 1185 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 IGHA2P01877 340 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms