RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, human

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3C-213	ENST00000569005	DHX33	Q9H6R0	707 aa	Known RBP	11.95	□□□□□ -0.5
EIF3C-213	ENST00000569005	ENTPD7	Q9NQZ7	604 aa		11.95	□□□□□ -0.5
EIF3C-213	ENST00000569005	CYP26B1	Q9NR63	512 aa		11.95	□□□□□ -0.5
EIF3C-213	ENST00000569005	TPCN1	Q9ULQ1	816 aa		11.95	□□□□□ -0.5
EIF3C-213	ENST00000569005	HCFC2	Q9Y5Z7	792 aa		11.95	□□□□□ -0.5
EIF3C-213	ENST00000569005	FAM205C	A6NFA0	338 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	NT5C1B-RDH14	C9J2C7	533 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	PFKFB2	O60825	505 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	ZNF623	O75123	536 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	WEE2	P0C1S8	567 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	FDPS	P14324	419 aa	Known RBP	11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	SFPQ	P23246	707 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	QARS	P47897	775 aa	Known RBP	11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	DNM2	P50570	870 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	AFF1	P51825	1210 aa	Known RBP	11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	KRT17	Q04695	432 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	CPLX2	Q6PUV4	134 aa	Known RBP	11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	TMC7	Q7Z402	723 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	NEK8	Q86SG6	692 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	RHPN2	Q8IUC4	686 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	FBXL6	Q8N531	539 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	FAM20A	Q96MK3	541 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	VN1R3	Q9BXE9	311 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	ZBP1	Q9H171	429 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	MINDY3	Q9H8M7	445 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	TBC1D13	Q9NVG8	400 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	PIN4	Q9Y237	131 aa	Known RBP	11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	ARID2	Q68CP9	1835 aa		11.94	□□□□□ -0.5
EIF3C-213	ENST00000569005	TBX3	O15119	743 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	CLASP2	O75122	1294 aa	Known RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	OFD1	O75665	1012 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	GCFC2	P16383	781 aa	Known RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	HOXB8	P17481	243 aa	Predicted RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	HOXA11	P31270	313 aa	Predicted RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	SMC1A	Q14683	1233 aa	Known RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	LONRF3	Q496Y0	759 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	UBXN11	Q5T124	520 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	TWF2	Q6IBS0	349 aa	Known RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	PIK3AP1	Q6ZUJ8	805 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	POTED	Q86YR6	584 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	C12orf76	Q8N812	135 aa	Predicted RBP	11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	RSPH1	Q8WYR4	309 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	NLRP4	Q96MN2	994 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	LXN	Q9BS40	222 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	NRDE2	Q9H7Z3	1164 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	AGPAT5	Q9NUQ2	364 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	FAM105A	Q9NUU6	356 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	DNAJB4	Q9UDY4	337 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	COL4A3BP	Q9Y5P4	624 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	IRAK3	Q9Y616	596 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	KMT2E	Q8IZD2	1858 aa		11.93	□□□□□ -0.5
EIF3C-213	ENST00000569005	CCDC194	A0A1B0GVG4	234 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	ZBTB39	O15060	712 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	CCNT1	O60563	726 aa	Known RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	CDKL5	O76039	1030 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	LARGE1	O95461	756 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	P4HB	P07237	508 aa	Known RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	GALT	P07902	379 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	SRGAP2B	P0DMP2	458 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	AVPR2	P30518	371 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	ALDH7A1	P49419	539 aa	Known RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	PTPN5	P54829	565 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	SIGLEC14	Q08ET2	396 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	NR5A1	Q13285	461 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	EPHA7	Q15375	998 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	AGMO	Q6ZNB7	445 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	CATSPER4	Q7RTX7	472 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	MRPL10	Q7Z7H8	261 aa	Known RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	ZNF280B	Q86YH2	543 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	SUGP1	Q8IWZ8	645 aa	Known RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	C4orf19	Q8IY42	314 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	PRPF31	Q8WWY3	499 aa	Known RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	AUTS2	Q8WXX7	1259 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	TMEM143	Q96AN5	459 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	IGSF21	Q96ID5	467 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	INO80B	Q9C086	356 aa	Predicted RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	SLK	Q9H2G2	1235 aa	Predicted RBP	11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	TSHZ2	Q9NRE2	1034 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	RGL1	Q9NZL6	768 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	PPME1	Q9Y570	386 aa		11.92	□□□□□ -0.5
EIF3C-213	ENST00000569005	MYO10	Q9HD67	2058 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	FRYL	O94915	3013 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005		H0Y858	1186 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	WNT7A	O00755	349 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	CTSA	P10619	480 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	SKI	P12755	728 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	YWHAB	P31946	246 aa	Known RBP	11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	RFC5	P40937	340 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	SLC11A1	P49279	550 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	RAB27A	P51159	221 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	POLG	P54098	1239 aa	Predicted RBP	11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	AK2	P54819	239 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	LAMTOR4	Q0VGL1	99 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	PTPN21	Q16825	1174 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	NOMO2	Q5JPE7	1267 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	GLB1L	Q6UWU2	654 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	SRGAP1	Q7Z6B7	1085 aa		11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	DDX53	Q86TM3	631 aa	Known RBP	11.91	□□□□□ -0.5
EIF3C-213	ENST00000569005	VPS52	Q8N1B4	723 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms