RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	PTGER2	P43116	358 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	QARS	P47897	775 aa	Known RBP	13.72	□□□□□ -0.21
PKM-222	ENST00000568883	CCT5	P48643	541 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	CDR1	P51861	262 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	GHRHR	Q02643	423 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	DHX34	Q14147	1143 aa	Known RBP	13.72	□□□□□ -0.21
PKM-222	ENST00000568883	ARHGAP44	Q17R89	818 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	XXYLT1	Q8NBI6	393 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	MTMR14	Q8NCE2	650 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	HOOK2	Q96ED9	719 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	GPR88	Q9GZN0	384 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	VPS33B	Q9H267	617 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	BCAS3	Q9H6U6	928 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	TMBIM4	Q9HC24	238 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	KCNH7	Q9NS40	1196 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	7e-7	■□□□□ 10.5
PKM-222	ENST00000568883	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.72	□□□□□ -0.21
PKM-222	ENST00000568883	SYNGAP1	Q96PV0	1343 aa		13.72	□□□□□ -0.21
PKM-222	ENST00000568883	ATXN2	Q99700	1313 aa	Known RBP	13.72	□□□□□ -0.21
PKM-222	ENST00000568883	MYH10	P35580	1976 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	BRWD3	Q6RI45	1802 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	NDUFAB1	O14561	156 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	ZBTB39	O15060	712 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	WDR46	O15213	610 aa	Known RBP	13.71	□□□□□ -0.21
PKM-222	ENST00000568883	FGG	P02679	453 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	ABCB4	P21439	1286 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	POLD1	P28340	1107 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	HSD17B3	P37058	310 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	EIF3B	P55884	814 aa	Known RBP	13.71	□□□□□ -0.21
PKM-222	ENST00000568883	PTEN	P60484	403 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	PLS1	Q14651	629 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	PCNX4	Q63HM2	1172 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	KCTD16	Q68DU8	428 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	USP37	Q86T82	979 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	KSR1	Q8IVT5	923 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	PRPF38A	Q8NAV1	312 aa	Known RBP	13.71	□□□□□ -0.21
PKM-222	ENST00000568883	LPAR1	Q92633	364 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	HVCN1	Q96D96	273 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	PSMD1	Q99460	953 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	VEZT	Q9HBM0	779 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	USP20	Q9Y2K6	914 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	SAMM50	Q9Y512	469 aa		13.71	□□□□□ -0.21
PKM-222	ENST00000568883	CNTNAP1	P78357	1384 aa		13.71	□□□□□ -0.22
PKM-222	ENST00000568883		A0A087WUV0	522 aa	Predicted RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	DDX3Y	O15523	660 aa	Known RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	GGPS1	O95749	300 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	ITGB5	P18084	799 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	ECHS1	P30084	290 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	JAK3	P52333	1124 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	ZYX	Q15942	572 aa	Known RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	AGBL2	Q5U5Z8	902 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	DAW1	Q8N136	415 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	RNPC3	Q96LT9	517 aa	Known RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	RUNDC3B	Q96NL0	473 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	GML	Q99445	158 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	PLEKHA4	Q9H4M7	779 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	AGO4	Q9HCK5	861 aa	Known RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	OSGEP	Q9NPF4	335 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	GINM1	Q9NU53	330 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	AMACR	Q9UHK6	382 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	UBIAD1	Q9Y5Z9	338 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	EMSY	Q7Z589	1322 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	DDX39A	O00148	427 aa	Known RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	SFN	P31947	248 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	RARRES1	P49788	294 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	GPC5	P78333	572 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	GTF2B	Q00403	316 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	DR1	Q01658	176 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	PDCL	Q13371	301 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	MTMR1	Q13613	665 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	TKFC	Q3LXA3	575 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	EPC2	Q52LR7	807 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	PHLDB3	Q6NSJ2	640 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.7	□□□□□ -0.22
PKM-222	ENST00000568883	LARGE2	Q8N3Y3	721 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	SH2D3C	Q8N5H7	860 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	AGBL3	Q8NEM8	1001 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	OLIG1	Q8TAK6	271 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	LMO3	Q8TAP4	145 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	RPS6KC1	Q96S38	1066 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	THAP2	Q9H0W7	228 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	EPN3	Q9H201	632 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	HSPBP1	Q9NZL4	362 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	CTTNBP2NL	Q9P2B4	639 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	ZHX2	Q9Y6X8	837 aa		13.7	□□□□□ -0.22
PKM-222	ENST00000568883	LOXHD1	Q8IVV2	1947 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	SRCAP	Q6ZRS2	3230 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	FOXN3	O00409	490 aa	Predicted RBP	13.69	□□□□□ -0.22
PKM-222	ENST00000568883	TTI1	O43156	1089 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	DAPK3	O43293	454 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	C21orf2	O43822	256 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	RTN2	O75298	545 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	GZMA	P12544	262 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	LSP1	P33241	339 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	MDH1	P40925	334 aa	Known RBP	13.69	□□□□□ -0.22
PKM-222	ENST00000568883	MXI1	P50539	228 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	SMTN	P53814	917 aa		13.69	□□□□□ -0.22
PKM-222	ENST00000568883	MFAP3	P55082	362 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms