RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 STK25O00506 426 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 ZNF623O75123 536 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 CNPP09543 421 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 RFX1P22670 979 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 GNA11P29992 359 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 CDC27P30260 824 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 SFNP31947 248 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 SLC11A1P49279 550 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 JAK3P52333 1124 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 TARBP2Q15633 366 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 UGCGQ16739 394 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 CMASQ8NFW8 434 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 URGCPQ8TCY9 931 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 STAMQ92783 540 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 RMDN1Q96DB5 314 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 TCEANC2Q96MN5 208 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 KLHL5Q96PQ7 755 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 RIT2Q99578 217 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 GBP3Q9H0R5 595 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 MRPL17Q9NRX2 175 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 FAM217BQ9NTX9 383 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 DNAJB4Q9UDY4 337 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
GTF3C1-209ENST00000568569 A0A087WZ62 844 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 KLF18A0A0U1RQI7 1052 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 CCDC196A0A1B0GTZ2 297 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 MEIS3P2A8K0S8 358 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 CHMP2AO43633 222 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 NARSO43776 548 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 GAS7O60861 476 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 OFD1O75665 1012 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 CFHP08603 1231 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 DNM2P50570 870 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 ELMSAN1Q6PJG2 1045 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 FDXACB1Q9BRP7 624 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 SEPT9Q9UHD8 586 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-209ENST00000568569 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 KRBA1A5PL33 1030 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 MSH4O15457 936 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 B4GALT3O60512 393 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 LILRB3O75022 631 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 N4BP1O75113 896 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 URODP06132 367 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 ADH1AP07327 375 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 XKR3Q5GH77 459 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 LRCH2Q5VUJ6 765 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 ZC3H14Q6PJT7 736 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 DGLUCYQ7Z3D6 616 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 ZNF280BQ86YH2 543 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 RDM1Q8NG50 284 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 BICD2Q8TD16 824 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 TEKT3Q9BXF9 490 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 NIFKQ9BYG3 293 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 WDR6Q9NNW5 1121 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 MAN1C1Q9NR34 630 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 DPP7Q9UHL4 492 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 MYH9P35579 1960 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 CEP250Q9BV73 2442 aa13.27□□□□□ -0.29
GTF3C1-209ENST00000568569 MED19A0JLT2 244 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 CLUHO75153 1309 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 ALDH2P05091 517 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 SRFP11831 508 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 GBP2P32456 591 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 OTOGLQ3ZCN5 2332 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 RHPN2Q8IUC4 686 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 KIAA2013Q8IYS2 634 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 RSAD2Q8WXG1 361 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 NXPE3Q969Y0 559 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 FAM193BQ96PV7 902 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 TBC1D17Q9HA65 648 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 RSAD1Q9HA92 442 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 SUCLA2Q9P2R7 463 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 EPS15L1Q9UBC2 864 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 SSX2IPQ9Y2D8 614 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 R4GN57 208 aa13.26□□□□□ -0.29
GTF3C1-209ENST00000568569 CNTNAP2Q9UHC6 1331 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms