RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 NDUFA8P51970 172 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 EARS2Q5JPH6 523 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 NBPF12Q5TAG4 269 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ANGEL2Q5VTE6 544 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 RESP18Q5W5W9 173 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 MCTP2Q6DN12 878 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 SASS6Q6UVJ0 657 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 HDXQ7Z353 690 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 NT5DC4Q86YG4 428 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ACER1Q8TDN7 264 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ZNF296Q8WUU4 475 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ANP32BQ92688 251 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 DCPSQ96C86 337 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 TIGD1Q96MW7 591 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 CLIC6Q96NY7 704 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 GOLPH3LQ9H4A5 285 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 VCPKMTQ9H867 229 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 PSTPIP2Q9H939 334 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 PIDD1Q9HB75 910 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 RIC8AQ9NPQ8 531 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ADARB2Q9NS39 739 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ZNF112Q9UJU3 913 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 DDX41Q9UJV9 622 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 FEM1BQ9UK73 627 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 SCAF8Q9UPN6 1271 aaKnown RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 PPP2R3BQ9Y5P8 575 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 SNCAIPQ9Y6H5 919 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 KIAA1551Q9HCM1 1747 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 KIF13BQ9NQT8 1826 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 FAM237AA0A1B0GTK4 181 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 FAM95CA0A1B0GW59 222 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 GREM1O60565 184 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 TCF3P15923 654 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 MCM7P33993 719 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 ECE1P42892 770 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 SYKP43405 635 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 NONOQ15233 471 aaKnown RBP eCLIP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 QRICH1Q2TAL8 776 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 ZBTB37Q5TC79 503 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 SHC4Q6S5L8 630 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 RASGRP2Q7LDG7 609 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 FAM160B2Q86V87 743 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 SMYD4Q8IYR2 804 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 SPICE1Q8N0Z3 855 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 FBXO27Q8NI29 283 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 ISL2Q96A47 359 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 NUP88Q99567 741 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 YIPF2Q9BWQ6 316 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 AMNQ9BXJ7 453 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 PICK1Q9NRD5 415 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 HOOK1Q9UJC3 728 aaKnown RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 FBXO2Q9UK22 296 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 KCNH3Q9ULD8 1083 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 PCDHA1Q9Y5I3 950 aa6.95□□□□□ -1.3
CAPN3-218ENST00000568153 ASTN2O75129 1339 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-218ENST00000568153 LAD1O00515 517 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 ADAMTS3O15072 1205 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 HYAL3O43820 417 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 CAVIN2O95810 425 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 PFKFB1P16118 471 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 LONP1P36776 959 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 STAT2P52630 851 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 USP14P54578 494 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 RAD51AP2Q09MP3 1159 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 ZRSR1Q15695 479 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 CDC37Q16543 378 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 INF2Q27J81 1249 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 FAM83BQ5T0W9 1011 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 PRAMEF18Q5VWM3 479 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 JAKMIP3Q5VZ66 844 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 ARL6IP4Q66PJ3 421 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 SEZ6L2Q6UXD5 910 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 RBM43Q6ZSC3 357 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 UBE3DQ7Z6J8 389 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 TEX2Q8IWB9 1127 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 ELOA2Q8IYF1 753 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 REXO1Q8N1G1 1221 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 C4orf32Q8N8J7 132 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 RASGRP4Q8TDF6 673 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 CUL5Q93034 780 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 CCDC34Q96HJ3 373 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 NAP1L4Q99733 375 aaKnown RBP6.94□□□□□ -1.3
CAPN3-218ENST00000568153 PANK2Q9BZ23 570 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 CSRNP2Q9H175 543 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 ZFP64Q9NPA5 681 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 IGSF5Q9NSI5 407 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 USP25Q9UHP3 1055 aa6.94□□□□□ -1.3
CAPN3-218ENST00000568153 HPSEQ9Y251 543 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms