RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 DAW1Q8N136 415 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 DNAJC7Q99615 494 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 GBP3Q9H0R5 595 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 EPHX3Q9H6B9 360 aa16.02■□□□□ 0.16
COMMD4-221ENST00000567935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.02■□□□□ 0.16
COMMD4-221ENST00000567935 PIEZO1Q92508 2521 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 USO1O60763 962 aaKnown RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 DGAT1O75907 488 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 ITGB8P26012 769 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 HOXD13P35453 343 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 RGS2P41220 211 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 SMTNP53814 917 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 MORN1Q5T089 497 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 METTL7BQ6UX53 244 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 SLC39A5Q6ZMH5 540 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 C12orf56Q8IXR9 622 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 SPIRE2Q8WWL2 714 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 ACCSQ96QU6 501 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 GAS2L1Q99501 681 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 APBA2Q99767 749 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 TTYH3Q9C0H2 523 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 NUCKS1Q9H1E3 243 aaKnown RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 ZNHIT6Q9NWK9 470 aaKnown RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 ARMCX3Q9UH62 379 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 DDX20Q9UHI6 824 aaKnown RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 EXOC7Q9UPT5 735 aa16.01■□□□□ 0.15
COMMD4-221ENST00000567935 MAFBQ9Y5Q3 323 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-221ENST00000567935 TCF20Q9UGU0 1960 aaKnown RBP16■□□□□ 0.15
COMMD4-221ENST00000567935 IGKV6D-21A0A0A0MT36 114 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 TTC26A0AVF1 554 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 K7ENM7 598 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 BACH1O14867 736 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 STRNO43815 780 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 TNNT1P13805 278 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 UBA1P22314 1058 aaKnown RBP16■□□□□ 0.15
COMMD4-221ENST00000567935 NMT1P30419 496 aaKnown RBP16■□□□□ 0.15
COMMD4-221ENST00000567935 CDK17Q00537 523 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 Q3C1V9 767 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 GJC2Q5T442 439 aaPredicted RBP16■□□□□ 0.15
COMMD4-221ENST00000567935 CEP135Q66GS9 1140 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 SWSAP1Q6NVH7 229 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 SEPT14Q6ZU15 432 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 ANO5Q75V66 913 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 ZNF467Q7Z7K2 595 aaPredicted RBP16■□□□□ 0.15
COMMD4-221ENST00000567935 CPLX3Q8WVH0 158 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 KCNN1Q92952 543 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 TIFAQ96CG3 184 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 EEF2KMTQ96G04 330 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 PPP1R13BQ96KQ4 1090 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 CEP170P1Q96L14 293 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 PORCNQ9H237 461 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 PRDM12Q9H4Q4 367 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 ZNF302Q9NR11 478 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 FLRT1Q9NZU1 646 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 SIK3Q9Y2K2 1263 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 PAXBP1Q9Y5B6 917 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 ARID2Q68CP9 1835 aa16■□□□□ 0.15
COMMD4-221ENST00000567935 ZNFX1Q9P2E3 1918 aaKnown RBP16■□□□□ 0.15
COMMD4-221ENST00000567935 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 TGFB1I1O43294 461 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 ZNF862O60290 1169 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 STBD1O95210 358 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 CCDC175P0C221 793 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 PSMC2P35998 433 aaKnown RBP15.99■□□□□ 0.15
COMMD4-221ENST00000567935 NCKAP1LP55160 1127 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 GTF2BQ00403 316 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 PRKCEQ02156 737 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 ADGRE1Q14246 886 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 MEA1Q16626 185 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 GPR142Q7Z601 462 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 CCDC60Q8IWA6 550 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-221ENST00000567935 EXOC8Q8IYI6 725 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 AFAP1L1Q8TED9 768 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 FAM167AQ96KS9 214 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 NTPCRQ9BSD7 190 aaKnown RBP15.99■□□□□ 0.15
COMMD4-221ENST00000567935 ATP6V0A4Q9HBG4 840 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 DMAC2Q9NW81 257 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 DAAM1Q9Y4D1 1078 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 ZMYM2Q9UBW7 1377 aa15.99■□□□□ 0.15
COMMD4-221ENST00000567935 XIRP2A4UGR9 3374 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 OATP04181 439 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 BMP1P13497 986 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 MAPK4P31152 587 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 HNRNPH3P31942 346 aaKnown RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 RFC5P40937 340 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 GOLGA8FQ08AF8 430 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 GOLGA8DPQ0D2H9 430 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 DMP1Q13316 513 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 HSP90AA2PQ14568 343 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 SNX17Q15036 470 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 PPP2R5AQ15172 486 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 UTP14CQ5TAP6 766 aaKnown RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 CYFIP1Q7L576 1253 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms