RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 SIX5Q8N196 739 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 ZNF713Q8N859 430 aaPredicted RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 DTWD2Q8NBA8 298 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 ACSF2Q96CM8 615 aaPredicted RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 IGSF21Q96ID5 467 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 VN1R3Q9BXE9 311 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 C22orf23Q9BZE7 217 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 SFXN1Q9H9B4 322 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 TBC1D22BQ9NU19 505 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 DUSP12Q9UNI6 340 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 MEIS3P2A8K0S8 358 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 ZBTB43O43298 467 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 B4GALT3O60512 393 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPG7-216ENST00000567138 CPA1P15085 419 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 ANAPC15P60006 121 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 DRP2Q13474 957 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 TDGQ13569 410 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 PRR16Q569H4 304 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 GPR149Q86SP6 731 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
SPG7-216ENST00000567138 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 SLC24A3Q9HC58 644 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 DACT1Q9NYF0 836 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 DNAJB4Q9UDY4 337 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
SPG7-216ENST00000567138 ARID2Q68CP9 1835 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 WDR64B1ANS9 1081 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 CHMP2AO43633 222 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 GALTP07902 379 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 HMGB1P09429 215 aaKnown RBP12.68□□□□□ -0.38
SPG7-216ENST00000567138 PSMA5P28066 241 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 CDC27P30260 824 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 PHKA2P46019 1235 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 SLC11A1P49279 550 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 RNASELQ05823 741 aaKnown RBP12.68□□□□□ -0.38
SPG7-216ENST00000567138 TBC1D8BQ0IIM8 1120 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 GIT2Q14161 759 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 NOMO2Q5JPE7 1267 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 TWF2Q6IBS0 349 aaKnown RBP12.68□□□□□ -0.38
SPG7-216ENST00000567138 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
SPG7-216ENST00000567138 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 RTP3Q9BQQ7 232 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 KCNK12Q9HB15 430 aa12.68□□□□□ -0.38
SPG7-216ENST00000567138 CACNA1IQ9P0X4 2223 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 PATJQ8NI35 1801 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 KLF18A0A0U1RQI7 1052 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 MED19A0JLT2 244 aaPredicted RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 CFHP08603 1231 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 MTERF2Q49AM1 385 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 GLB1LQ6UWU2 654 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 PPFIBP1Q86W92 1011 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 LENG9Q96B70 501 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 RMDN1Q96DB5 314 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 NRBP2Q9NSY0 501 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 PIN4Q9Y237 131 aaKnown RBP12.67□□□□□ -0.38
SPG7-216ENST00000567138 R4GN57 208 aa12.67□□□□□ -0.38
SPG7-216ENST00000567138 A0A087WZ62 844 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 TMEM150BA6NC51 233 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 N4BP1O75113 896 aaKnown RBP12.66□□□□□ -0.38
SPG7-216ENST00000567138 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
SPG7-216ENST00000567138 MYBP10242 640 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
SPG7-216ENST00000567138 RFX1P22670 979 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 KLRC2P26717 231 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 CLCN4P51793 760 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
SPG7-216ENST00000567138 RUFY3Q7L099 469 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 ZNF280BQ86YH2 543 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
SPG7-216ENST00000567138 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 RSAD2Q8WXG1 361 aa12.66□□□□□ -0.38
SPG7-216ENST00000567138 GJA10Q969M2 543 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms