RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TMEM174Q8WUU8 243 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 RFFLQ8WZ73 363 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
CMTM3-213ENST00000566756 SLC38A10Q9HBR0 1119 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 TMBIM4Q9HC24 238 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 AJAP1Q9UKB5 411 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-213ENST00000566756 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 PCDHB13Q9Y5F0 798 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
CMTM3-213ENST00000566756 GOLGA6L10A6NI86 522 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 EVI5O60447 810 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 TADA2BQ86TJ2 420 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■■□ 21.3
CMTM3-213ENST00000566756 OLIG1Q8TAK6 271 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 NACC1Q96RE7 527 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 FIZ1Q96SL8 496 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 PLEKHA4Q9H4M7 779 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 EFCC1Q9HA90 598 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 RGL1Q9NZL6 768 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 KRIT1O00522 736 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 CLIC2O15247 247 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 USP2O75604 605 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-213ENST00000566756 GALCP54803 685 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 BIRC3Q13489 604 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 LRCH2Q5VUJ6 765 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 ZNF720Q7Z2F6 126 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
CMTM3-213ENST00000566756 EPN3Q9H201 632 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 MAP3K20Q9NYL2 800 aaKnown RBP18.18■□□□□ 0.5
CMTM3-213ENST00000566756 GGA2Q9UJY4 613 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 FAM169AQ9Y6X4 670 aa18.18■□□□□ 0.5
CMTM3-213ENST00000566756 TMCO5BA8MYB1 307 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 CFBP00751 764 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 TAL1P17542 331 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 GUCY2CP25092 1073 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 HADHBP55084 474 aaKnown RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 PPATQ06203 517 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 ITGB3BPQ13352 177 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 HLTFQ14527 1009 aaKnown RBP eCLIP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 RUFY4Q6ZNE9 571 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 DAAM2Q86T65 1068 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 SULF1Q8IWU6 871 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 CYP2W1Q8TAV3 490 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 LNX1Q8TBB1 728 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 NAP1L3Q99457 506 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 RPAP3Q9H6T3 665 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 FAM114A2Q9NRY5 505 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 CCPG1Q9ULG6 757 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 FRMD4BQ9Y2L6 1034 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 ZHX2Q9Y6X8 837 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 SCN4AP35499 1836 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 H0YGN5 161 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 LSP1P33241 339 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 HSD17B3P37058 310 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 RNASE9P60153 205 aaKnown RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 SETQ01105 290 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 KCNA1Q09470 495 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 PDCLQ13371 301 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 TCEAL1Q15170 157 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 USP50Q70EL3 339 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 SH2D3CQ8N5H7 860 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 C3orf20Q8ND61 904 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 NEK9Q8TD19 979 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 ZC3H15Q8WU90 426 aaKnown RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 DYDC2Q96IM9 177 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 RNPC3Q96LT9 517 aaKnown RBP18.17■□□□□ 0.5
CMTM3-213ENST00000566756 NFS1Q9Y697 457 aa18.17■□□□□ 0.5
CMTM3-213ENST00000566756 PTPRFP10586 1907 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 WDR90Q96KV7 1748 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 NDUFAB1O14561 156 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 PPP1R37O75864 691 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 MYZAPP0CAP1 466 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 MDH1P40925 334 aaKnown RBP18.16■□□□□ 0.5
CMTM3-213ENST00000566756 HSD17B4P51659 736 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 KCTD16Q68DU8 428 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 CTNNBL1Q8WYA6 563 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-213ENST00000566756 STRA6Q9BX79 667 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 CARD9Q9H257 536 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 AGPAT3Q9NRZ7 376 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 APEX2Q9UBZ4 518 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 DNAJC12Q9UKB3 198 aa18.16■□□□□ 0.5
CMTM3-213ENST00000566756 OTOFQ9HC10 1997 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 NMT1P30419 496 aaKnown RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 POU5F1Q01860 360 aaKnown RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 ALCAMQ13740 583 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 KIF22Q14807 665 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 DRAP1Q14919 205 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 TRADDQ15628 312 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 CEP85LQ5SZL2 805 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 AGBL2Q5U5Z8 902 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 B3GNT9Q6UX72 402 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 MICALCLQ6ZW33 695 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 MCF2L2Q86YR7 1114 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms